Evidence map›Paper›PMID 21526979›Full record

ReviewCritical reviews in biochemistry and molecular biology2011

Revealing histone variant induced changes via quantitative proteomics.

Anna M Arnaudo, Rosalynn C Molden, Benjamin A Garcia

Abstract readReview
In one paragraph

Review in Critical reviews in biochemistry and molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Histone variant-specific post-translational modifications.Seminars in cell & developmental biology · 2023
    Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Mass spectrometric analysis of histone proteoforms.Annual review of analytical chemistry (Palo Alto, Calif.) · 2014
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anna M ArnaudoDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Rosalynn C Molden
Benjamin A Garcia

Funding

Novel Methodology for Quantitative High-throughput Cancer EpigeneticsDP2OD007447 · OD · UNIVERSITY OF PENNSYLVANIA · PI GARCIA, BENJAMIN A · 2010 to 2010
$2.4M
NIH HHS DP2 OD007447NIH HHS DP2OD007447
6 · The paper itself

Abstract

Histone variants are isoforms of linker and core histone proteins that differ in their amino acid sequences. These variants have distinct genomic locations and posttranslational modifications, thus increasing the complexity of the chromatin architecture. Biological studies of histone variants indicate that they play a role in many processes including transcription, DNA damage response, and the cell cycle. The small differences in amino acid sequence and the diverse posttranslational modification states that exist between histone variants make traditional analysis using immunoassay methods challenging. In recent years, a number of mass spectrometric techniques have been developed to identify and quantify histones at the whole protein or peptide levels. In this review, we discuss the biology of histone variants and methods to characterize them using mass spectrometry-based proteomics.

Indexed as

AcetylationAmino Acid SequenceChromatinChromatography, High Pressure LiquidDNA ReplicationHistonesIsotope LabelingMolecular Sequence DataPeptidesPhosphorylationProtein IsoformsProtein Processing, Post-TranslationalProteomicsSequence AlignmentTranscriptional ActivationChromatinHistonesPeptidesProtein Isoforms

Identifiers

PMID21526979
PMCPMC3144284

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.