Evidence map›Paper›PMID 21526452›Full record

ArticleNutrition and cancer2011

Differential expression of thrombospondin (THBS1) in tumorigenic and nontumorigenic prostate epithelial cells in response to a chromatin-binding soy peptide.

Alfredo F Galvez, Liping Huang, Mark M J Magbanua, Kevin Dawson, Raymond L Rodriguez

Open access · greenAbstract read
In one paragraph

Article in Nutrition and cancer, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Lunasin and Its Epigenetic Impact in Cancer Chemoprevention.International journal of molecular sciences · 2023
    Review
  3. Article
  4. Lunasin as a Promising Plant-Derived Peptide for Cancer Therapy.International journal of molecular sciences · 2022
    Review
  5. Review
  6. Article
  7. Article
  8. Revisiting the matricellular concept.Matrix biology : journal of the International Society for Matrix Biology · 2014
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Alfredo F GalvezCenter of Excellence in Nutritional Genomics, Department of Molecular and Cellular Biology, University of California Davis, Davis, California 95616, USA.
Liping Huang
Mark M J Magbanua
Kevin Dawson
Raymond L Rodriguez
University of California, Davis · USCity of Hope · USUniversity of California, San Francisco · USWestern Human Nutrition Research Center · US

Funding

NCMHD Center of Excellence in Nutritional GenomicsP60MD000222 · NIMHD · UNIVERSITY OF CALIFORNIA DAVIS · PI RODRIGUEZ, RAYMOND L · 2003 to 2009
$8.4M
NIMHD NIH HHS P60 MD000222NIMHD NIH HHS P60-MD00222
6 · The paper itself

Abstract

The chemopreventive properties of the chromatin-binding soy peptide, lunasin, are well documented, but its mechanism of action is unclear. To elucidate the mechanism by which lunasin reduces tumor foci formation in cultured mammalian cells, nontumorigenic (RWPE-1) and tumorigenic (RWPE-2) human prostate epithelial cells were treated with lunasin followed by gene expression profiling and characterization of the chromatin acetylation status for certain chemopreventive genes. The genes HIF1A, PRKAR1A, TOB1, and THBS1 were upregulated by lunasin in RWPE-1 but not in RWPE-2 cells. Using histone acetyltransferase (HAT) assays with acid-extracted histones as templates, we showed that lunasin specifically inhibited H4K8 acetylation while enhanced H4K16 acetylation catalyzed by HAT enzymes p300, PCAF, and HAT1A. These results suggest a novel mechanism for lunasin-dependent upregulation of gene expression. Chromatin immunoprecipitation (ChIP) revealed hypoacetylation of H4K16 in RWPE-2 cells, specifically at the 5' end of THBS1 containing a CpG island. Moreover, bisulfite PCR (BSP) and subsequent DNA sequencing indicated that this CpG island was hypomethylated in RWPE-1 but hypermethylated in RWPE-2 cells. Histone hypoacetylation and DNA hypermethylation in the 5' region of THBS1 may explain the inability of lunasin to upregulate this gene in RWPE-2 cells.

Indexed as

PhytotherapyAnimalsChemopreventionChromatinChromatin ImmunoprecipitationCpG IslandsDNA MethylationEpigenomicsEpithelial CellsHistonesHumansMaleMiceOligonucleotide Array Sequence AnalysisPlant ExtractsProstateChromatinHistonesPlant ExtractsSoybean ProteinsThrombospondins

Identifiers

PMID21526452
PMCPMC3210036
OpenAlexW2039065480

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.