Evidence map›Paper›PMID 21520245›Full record

ArticleJournal of cellular biochemistry2011

β-globin matrix attachment region improves stable genomic expression of the Sleeping Beauty transposon.

Lucas Sjeklocha, Yixin Chen, Meghan C Daly, Clifford J Steer, Betsy T Kren

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lucas Sjeklocha *Department of Medicine, University of Minnesota Medical School, Minneapolis, Minnesota, 55455.
Yixin Chen *Department of Medicine, University of Minnesota Medical School, Minneapolis, Minnesota, 55455.
Meghan C DalyDepartment of Medicine, University of Minnesota Medical School, Minneapolis, Minnesota, 55455.
Clifford J SteerDepartment of Medicine, University of Minnesota Medical School, Minneapolis, Minnesota, 55455.
Betsy T KrenDepartment of Medicine, University of Minnesota Medical School, Minneapolis, Minnesota, 55455.
University of Minnesota Medical Center · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Douglas Yee · 1998 to 2026
$100.4M
Sleeping Beauty Gene Therapy from Liver to BOECsR01HL081582 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI STEER, CLIFFORD JOHN · 2005 to 2008
$1.4M
Non-viral gene therapy for sickle cell anemiaR21HL096469 · NHLBI · UNIVERSITY OF MINNESOTA · PI HEBBEL, ROBERT P, STEER, CLIFFORD JOHN · 2009 to 2011
$1.4M
In Utero Correction of the OTC Defect in LiverR01DK067436 · NIDDK · UNIVERSITY OF MINNESOTA · PI KREN, BETSY T · 2007 to 2011
$1.4M
Non-viral gene therapy for sickle cell anemiaR33HL096469 · NHLBI · UNIVERSITY OF MINNESOTA · PI HEBBEL, ROBERT P, STEER, CLIFFORD JOHN · 2012 to 2012
$633k
NCI NIH HHS P30 CA077598NCI NIH HHS P30 CA77598NHLBI NIH HHS R01 HL081582NHLBI NIH HHS R01 HL096469NHLBI NIH HHS R21 HL096469NHLBI NIH HHS R33 HL096469NIDDK NIH HHS R01 DK067436
6 · The paper itself

Abstract

The liver is an attractive target for gene therapy due to its extensive capability for protein production and the numerous diseases resulting from a loss of gene function it normally provides. The Sleeping Beauty Transposon (SB-Tn)(1) system is a non-viral vector capable of delivering and mediating therapeutic transgene(s) insertion into the host genome for long-term expression. A current challenge for this system is the low efficiency of integration of the transgene. In this study we use a human hepatoma cell line (HuH-7) and primary human blood outgrowth endothelial cells (BOECs) to test vectors containing DNA elements to enhance transposition without integrating themselves. We employed the human β-globin matrix attachment region (MAR) and the Simian virus 40 (SV40) nuclear translocation signal to increase the percent of HuH-7 cells persistently expressing a GFP::Zeo reporter construct by ∼50% for each element; while combining both did not show an additive effect. Interestingly, both elements together displayed an additive effect on the number of insertion sites, and in BOECs the SV40 alone appeared to have an inhibitory effect on transposition. In long-term cultures the loss of plasmid DNA, transposase expression and mapping of insertion sites demonstrated bona fide transposition without episomal expression. These results show that addition of the β-globin MAR and potentially other elements to the backbone of SB-Tn system can enhance transposition and expression of therapeutic transgenes. These findings may have a significant influence on the use of SB transgene delivery to liver for the treatment of a wide variety of disorders.

Indexed as

Gene ExpressionMatrix Attachment Regionsbeta-GlobinsCell Line, TumorCloning, MolecularDNA Transposable ElementsEndothelial CellsEnhancer Elements, GeneticGenes, ReporterGenetic TherapyGreen Fluorescent ProteinsHMGB1 ProteinHumansPlasmidsPrimary Cell CultureRecombinant Proteinsbeta-GlobinsDNA Transposable ElementsGreen Fluorescent ProteinsHMGB1 ProteinRecombinant Proteinssleeping beauty transposase, humanTransposases

Identifiers

PMID21520245
PMCPMC3972825
OpenAlexW2157545440

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.