Evidence map›Paper›PMID 21518901›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Identification of key factors that reduce the variability of the single photon response.

Giovanni Caruso, Paolo Bisegna, Daniele Andreucci, Leonardo Lenoci, Vsevolod V Gurevich, Heidi E Hamm, Emmanuele DiBenedetto

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  8. Sperm Sensory Signaling.Cold Spring Harbor perspectives in biology · 2017
    Review
  9. Article
  10. The phototransduction machinery in the rod outer segment has a strong efficacy gradient.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. The functional cycle of visual arrestins in photoreceptor cells.Progress in retinal and eye research · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Giovanni CarusoConstruction Technologies Institute, National Research Council, 00015 Rome, Italy.
Paolo Bisegna
Daniele Andreucci
Leonardo Lenoci
Vsevolod V Gurevich
Heidi E Hamm
Emmanuele DiBenedetto
Vanderbilt University Medical Center · USNational Research Council · ITSapienza University of Rome · ITUniversity of Rome Tor Vergata · ITVanderbilt University · US

Funding

STRUCTURE/FUNCTION STUDIES OF VISUAL ARRESTINR01EY011500 · NEI · VANDERBILT UNIVERSITY · PI T M Iverson · 1997 to 2026
$12.3M
IMMUNOLOGICAL STUDIES OF VISUAL TRANSDUCTION PATHWAYSR01EY006062 · NEI · VANDERBILT UNIVERSITY · PI HAMM, HEIDI E · 1985 to 2017
$5.6M
Arrestin interactions with non-receptor binding partnersR01GM077561 · NIGMS · VANDERBILT UNIVERSITY · PI GUREVICH, VSEVOLOD V. · 2007 to 2015
$2.3M
Conformational regulation of arrestin-mediated signalingR01GM081756 · NIGMS · VANDERBILT UNIVERSITY · PI GUREVICH, VSEVOLOD V. · 2008 to 2011
$1.5M
Mathematical Models of Dynamics of Visual TransductionR01GM068953 · NIGMS · VANDERBILT UNIVERSITY · PI DIBENEDETTO, EMMANUELE · 2003 to 2006
$933k
NEI NIH HHS EY006062NEI NIH HHS EY0102291NEI NIH HHS EY011500NEI NIH HHS R01 EY006062NEI NIH HHS R01 EY011500NIGMS NIH HHS 1R01GM068953NIGMS NIH HHS GM077561NIGMS NIH HHS GM081756NIGMS NIH HHS R01 GM068953NIGMS NIH HHS R01 GM077561NIGMS NIH HHS R01 GM081756
6 · The paper itself

Abstract

Rod photoreceptors mediate vision in dim light. Their biological function is to discriminate between distinct, very low levels of illumination, i.e., they serve as reliable photon counters. This role requires high reproducibility of the response to a particular number of photons. Indeed, single photon responses demonstrate unexpected low variability, despite the stochastic nature of the individual steps in the transduction cascade. We analyzed individual system mechanisms to identify their contribution to variability suppression. These include: (i) cooperativity of the regulation of the second messengers; (ii) diffusion of cGMP and Ca(2+) in the cytoplasm; and (iii) the effect of highly localized cGMP hydrolysis by activated phosphodiesterase resulting in local saturation. We find that (i) the nonlinear relationships between second messengers and current at the plasma membrane, and the cGMP hydrolysis saturation effects, play a major role in stabilizing the system; (ii) the presence of a physical space where the second messengers move by Brownian motion contributes to stabilization of the photoresponse; and (iii) keeping Ca(2+) at its dark level has only a minor effect on the variability of the system. The effects of diffusion, nonlinearity, and saturation synergize in reducing variability, supporting the notion that the observed high fidelity of the photoresponse is the result of global system function of phototransduction.

Indexed as

Models, BiologicalAnimalsCalciumCyclic GMPLightLight Signal TransductionMicePhotonsRetinal Rod Photoreceptor CellsRhodopsinRod Cell Outer SegmentSecond Messenger SystemsStochastic ProcessesCalciumCyclic GMPRhodopsin

Identifiers

PMID21518901
PMCPMC3093507
OpenAlexW2016957498

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.