Evidence map›Paper›PMID 21518797›Full record

ArticleThe Journal of experimental medicine2011

The lineage-defining factors T-bet and Bcl-6 collaborate to regulate Th1 gene expression patterns.

Kenneth J Oestreich, Albert C Huang, Amy S Weinmann

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed, 1 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 1 synthesis or guideline pooled it, 151 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Key Functions of the Transcription Factor BCL6 During T-Cell Differentiation.Advances in experimental medicine and biology · 2024
    Review
  8. Exploring TCR-like CAR-Engineered Lymphocyte Cytotoxicity against MAGE-A4.International journal of molecular sciences · 2023
    Article
  9. Vaccine adjuvant-elicited CD8Cell reports · 2023
    Article
  10. Article
  11. Article
  12. Aiolos represses CD4Nature communications · 2023
    Article
  13. TCF-1 Is Required for CD4 T Cell Persistence Functions during AlloImmunity.International journal of molecular sciences · 2023
    Article
  14. Article
  15. Review
  16. Making memories with Bcl-6.The Journal of experimental medicine · 2022
    Article
  17. Article
  18. CD4Cold Spring Harbor perspectives in biology · 2021
    Review
  19. Review
  20. Protein Immunization Induces Memory CD4Journal of immunology (Baltimore, Md. : 1950) · 2021
    Article

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kenneth J OestreichDepartment of Immunology, University of Washington, Seattle, WA 98195, USA.
Albert C Huang
Amy S Weinmann
University of Washington · US

Funding

Molecular characterization of the role for T-bet and Bcl-6 in immune cell metabolism and differentiationR01AI061061 · NIAID · UNIVERSITY OF WASHINGTON · PI WEINMANN, AMY SUSAN · 2004 to 2025
$7.0M
TRAINING PEDIATRIC SCIENTISTS IN BASIC IMMUNOLOGYT32AI007411 · NIAID · UNIVERSITY OF WASHINGTON · PI GOVERMAN, JOAN M · 1993 to 2012
$2.6M
VIRUS INFECTIONS: PATHOGENESIS &HOST IMMUNE RESPONSEST32AI007272 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FINBERG, ROBERT WILLIAM · 1985 to 2009
$1.9M
TRANSCRIPTIONAL CONTROL OF INTERFERON-GAMMA IN T AND NK CELLSR01AI071272 · NIAID · UNIVERSITY OF WASHINGTON · PI WEINMANN, AMY SUSAN · 2006 to 2010
$1.7M
Molecular characterization of the role for metabolites in immune cell differentiationR56AI061061 · NIAID · UNIVERSITY OF WASHINGTON · PI WEINMANN, AMY SUSAN · 2009 to 2021
$672k
NIAID NIH HHS 5T32 AI 07411NIAID NIH HHS AI061061NIAID NIH HHS AI07272NIAID NIH HHS R01 AI061061NIAID NIH HHS R01 AI071272NIAID NIH HHS R56 AI061061NIAID NIH HHS T32 AI007272NIAID NIH HHS T32 AI007411
6 · The paper itself

Abstract

The T-box transcription factor T-bet is important for the differentiation of naive CD4(+) T helper cells (Th cells) into the Th1 phenotype. Much is known about T-bet's role as a transcriptional activator, but less is known about the mechanisms by which T-bet functionally represses alternative Th cell genetic programs. In this study, we first identify Socs1, Socs3, and Tcf7 (TCF-1) as gene targets that are negatively regulated by T-bet. Significantly, T-bet's role in the repression of these genes is through a direct interaction with their promoters. Consistent with this, we identified two T-bet DNA-binding elements in the Socs1 promoter that are functionally used to down-regulate transcription in primary Th1 cells. Importantly, T-bet's novel role in transcriptional repression is because of its ability to physically associate with, and functionally recruit, the transcriptional repressor Bcl-6 to a subset of promoters. Furthermore, T-bet functionally recruits Bcl-6 to the Ifng locus in late stages of Th1 differentiation to repress its activity, possibly to prevent the overproduction of IFN-γ, which could result in autoimmunity. Collectively, these data establish a novel mechanism for T-bet-mediated gene repression in which two lineage-defining transcription factors, one a classical activator and one a repressor, collaborate to promote and properly regulate Th1 development.

Indexed as

AnimalsAutoimmunityCell DifferentiationCell LineDown-RegulationGenetic LociHepatocyte Nuclear Factor 1-alphaMiceMice, KnockoutProto-Oncogene Proteins c-bcl-6Repressor ProteinsResponse ElementsSuppressor of Cytokine Signaling 1 ProteinSuppressor of Cytokine Signaling 3 ProteinSuppressor of Cytokine Signaling ProteinsT-bet Transcription FactorHepatocyte Nuclear Factor 1-alphaHnf1a protein, mouseProto-Oncogene Proteins c-bcl-6Repressor ProteinsSocs1 protein, mouseSocs3 protein, mouseSuppressor of Cytokine Signaling 1 ProteinSuppressor of Cytokine Signaling 3 ProteinSuppressor of Cytokine Signaling ProteinsT-bet Transcription FactorT-Box Domain ProteinsT Cell Transcription Factor 1

Identifiers

PMID21518797
PMCPMC3092354
OpenAlexW2144219966

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.