Evidence map›Paper›PMID 21517033›Full record

ArticleThe journal of physical chemistry. B2011

Probing amyloid fibril growth by two-dimensional near-ultraviolet spectroscopy.

Jun Jiang, Shaul Mukamel

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Machine learning recognition of protein secondary structures based on two-dimensional spectroscopic descriptors.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jun JiangChemistry Department, University of California, Irvine, Irvine, California 92697, USA. jiangj1@uci.edu
Shaul Mukamel
University of California, Irvine · US

Funding

Multidimensional Femtosecond Correlation Spectroscopic Probes of BiomoleculesR01GM059230 · NIGMS · UNIVERSITY OF ROCHESTER · PI MUKAMEL, SHAUL · 2001 to 2013
$3.2M
Developing 2D UV/vis spectroscopy tools to study biomolecular recognitionRC1GM091364 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI MUKAMEL, SHAUL, ROMESBERG, FLOYD E. · 2009 to 2010
$949k
NIGMS NIH HHS GM059230NIGMS NIH HHS GM091364NIGMS NIH HHS R01 GM059230NIGMS NIH HHS RC1 GM091364
6 · The paper itself

Abstract

Keeping track of the aggregation kinetics of amyloid fibrils is essential for understanding their formation mechanism and eventually developing treatments for misfolded protein-related diseases. A simulation study of a series of Aβ(9-40) amyloid fibrils with different size shows that novel two-dimensional near-ultraviolet (2DNUV) spectra contain characteristic signatures of interactions between peptides. Chiral 2DNUV signals show a larger degree of exciton delocalization compared to their nonchiral counterparts. Intensities of specific peaks provide a direct measure of the number of peptides in a fibril. These signals could be used to monitor the fibril growth kinetics, one peptide at a time.

Indexed as

AmyloidAmyloid beta-PeptidesKineticsMolecular Dynamics SimulationQuantum TheorySpectrophotometry, UltravioletAmyloidAmyloid beta-Peptides

Identifiers

PMID21517033
PMCPMC3112003
OpenAlexW1979857852

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.