Evidence map›Paper›PMID 21515771›Full record

ArticleJournal of bacteriology2011

Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum.

Philippe Ortet, Mohamed Barakat, David Lalaouna, Sylvain Fochesato, Valérie Barbe, Benoit Vacherie, Catherine Santaella, Thierry Heulin, Wafa Achouak

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Philippe OrtetCEA, DSV, IBEB, SBVME, Lab Ecol Microb Rhizosphere & Environ Extrem (LEMiRE), Saint-Paul-lez-Durance, F-13108, France.
Mohamed Barakat
David Lalaouna
Sylvain Fochesato
Valérie Barbe
Benoit Vacherie
Catherine Santaella
Thierry Heulin
Wafa Achouak
CEA Cadarache · FRAix-Marseille Université · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRGenoscope · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To shed light on the genetic equipment of the beneficial plant-associated bacterium Pseudomonas brassicacearum, we sequenced the whole genome of the strain NFM421. Its genome consists of one chromosome equipped with a repertoire of factors beneficial for plant growth. In addition, a complete type III secretion system and two complete type VI secretion systems were identified. We report here the first genome sequence of this species.

Indexed as

Genome, BacterialDNA, BacterialGene Expression Regulation, BacterialMolecular Sequence DataPlant RootsPseudomonasDNA, Bacterial

Identifiers

PMID21515771
PMCPMC3133198
OpenAlexW2114927758

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.