Evidence map›Paper›PMID 21515684›Full record

ArticleThe Journal of biological chemistry2011

Structure of the membrane-tethering GRASP domain reveals a unique PDZ ligand interaction that mediates Golgi biogenesis.

Steven T Truschel, Debrup Sengupta, Adam Foote, Annie Heroux, Mark R Macbeth, Adam D Linstedt

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Review
  3. Structural Evidence for DUF512 as a RadicalACS bio & med chem Au · 2024
    Article
  4. Article
  5. Retro-2 alters Golgi structure.Scientific reports · 2022
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. PDZ Domains as Drug Targets.Advanced therapeutics · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Glycosylation Quality Control by the Golgi Structure.Journal of molecular biology · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Steven T TruschelDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.
Debrup Sengupta
Adam Foote
Annie Heroux
Mark R Macbeth
Adam D Linstedt

Funding

X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI ORVILLE, ALLEN M · 1998 to 2011
$32.2M
RETRIEVAL PATHWAY IN GOLGI STACK TARGETINGR01GM056779 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI LINSTEDT, ADAM D · 1998 to 2015
$4.1M
STRUCTURAL BASIS OF ORGANELLE TETHERINGR01GM095549 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI LINSTEDT, ADAM D · 2011 to 2014
$1.2M
NCRR NIH HHS P41 RR012408NCRR NIH HHS P41RR012408NIGMS NIH HHS GM-56779NIGMS NIH HHS R01 GM056779NIGMS NIH HHS R01 GM095549
6 · The paper itself

Abstract

Biogenesis of the ribbon-like membrane network of the mammalian Golgi requires membrane tethering by the conserved GRASP domain in GRASP65 and GRASP55, yet the tethering mechanism is not fully understood. Here, we report the crystal structure of the GRASP55 GRASP domain, which revealed an unusual arrangement of two tandem PDZ folds that more closely resemble prokaryotic PDZ domains. Biochemical and functional data indicated that the interaction between the ligand-binding pocket of PDZ1 and an internal ligand on PDZ2 mediates the GRASP self-interaction, and structural analyses suggest that this occurs via a unique mode of internal PDZ ligand recognition. Our data uncover the structural basis for ligand specificity and provide insight into the mechanism of GRASP-dependent membrane tethering of analogous Golgi cisternae.

Indexed as

Protein FoldingCrystallography, X-RayGolgi ApparatusGolgi Matrix ProteinsHeLa CellsHumansIntracellular MembranesMembrane ProteinsPDZ DomainsGolgi Matrix ProteinsGORASP1 protein, humanGORASP2 protein, humanMembrane Proteins

Identifiers

PMID21515684
PMCPMC3121478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.