Evidence map›Paper›PMID 21514798›Full record

ArticleInternational journal of antimicrobial agents2011

Genetic regulation of the ramA locus and its expression in clinical isolates of Klebsiella pneumoniae.

R Rosenblum, E Khan, G Gonzalez, R Hasan, T Schneiders

Open access · hybridAbstract read
In one paragraph

Article in International journal of antimicrobial agents, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 92 citations in OpenAlex.

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  15. Genomic characterization of tigecycline-resistantFrontiers in microbiology · 2023
    Article
  16. Intrinsic Antibacterial Activity of XeruborbactamAntimicrobial agents and chemotherapy · 2022
    Article
  17. Article
  18. Tigecycline antibacterial activity, clinical effectiveness, and mechanisms and epidemiology of resistance: narrative review.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

R RosenblumCentre for Infection and Immunity, 4th Floor, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
E Khan
G Gonzalez
R Hasan
T Schneiders
Aga Khan University · PKUniversity of Concepción · CL

Funding

Medical Research Council G0601199
6 · The paper itself

Abstract

Tigecycline resistance has been attributed to ramA overexpression and subsequent acrA upregulation. The ramA locus, originally identified in Klebsiella pneumoniae, has homologues in Enterobacter and Salmonella spp. In this study, we identify in silico that the ramR binding site is also present in Citrobacter spp. and that Enterobacter, Citrobacter and Klebsiella spp. share key regulatory elements in the control of the romA-ramA locus. RACE (rapid amplification of cDNA ends) mapping indicated that there are two promoters from which romA-ramA expression can be regulated in K. pneumoniae. Correspondingly, electrophoretic binding studies clearly showed that purified RamA and RamR proteins bind to both of these promoters. Hence, there appear to be two RamR binding sites within the Klebsiella romA-ramA locus. Like MarA, RamA binds the promoter region, implying that it might be subject to autoregulation. We have identified changes within ramR in geographically distinct clinical isolates of K. pneumoniae. Intriguingly, levels of romA and ramA expression were not uniformly affected by changes within the ramR gene, thereby supporting the dual promoter finding. Furthermore, a subset of strains sustained no changes within the ramR gene but which still overexpressed the romA-ramA genes, strongly suggesting that a secondary regulator may control ramA expression.

Indexed as

Gene Expression Regulation, BacterialAnti-Bacterial AgentsBacterial ProteinsBase SequenceBinding SitesDrug Resistance, BacterialGenes, BacterialHumansKlebsiella InfectionsKlebsiella pneumoniaeMembrane Transport ProteinsMicrobial Sensitivity TestsMinocyclineMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionTigecyclineAcrR protein, Klebsiella pneumoniaeAnti-Bacterial AgentsBacterial ProteinsMembrane Transport ProteinsMinocyclineRamA protein, KlebsiellaTigecycline

Identifiers

PMID21514798
PMCPMC3117140
OpenAlexW2036121975

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.