Evidence map›Paper›PMID 21504739›Full record

ArticleBiophysical journal2011

Naproxen interferes with the assembly of Aβ oligomers implicated in Alzheimer's disease.

Seongwon Kim, Wenling E Chang, Rashmi Kumar, Dmitri K Klimov

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. [Current radiopharmaceuticals · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Disordered binding of small molecules to Aβ(12-28).The Journal of biological chemistry · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Seongwon KimSchool of Systems Biology, George Mason University, Manassas, Virginia, USA.
Wenling E Chang
Rashmi Kumar
Dmitri K Klimov
George Mason University · USMitre (United States) · US

Funding

Pathways of Alzehimer's amyloid assembly studied by computer simulationsR01AG028191 · NIA · GEORGE MASON UNIVERSITY · PI KLIMOV, DMITRI KONSTANTINOVICH · 2007 to 2009
$490k
NIA NIH HHS R01 AG028191
6 · The paper itself

Abstract

Experimental and epidemiological studies have shown that the nonsteroidal antiinflammatory drug naproxen may be useful in the treatment of Alzheimer's disease. To investigate the interactions of naproxen with Aβ dimers, which are the smallest cytotoxic aggregated Aβ peptide species, we use united atom implicit solvent model and exhaustive replica exchange molecular dynamics. We show that naproxen ligands bind to Aβ dimer and penetrate its volume interfering with the interpeptide interactions. As a result naproxen induces a destabilizing effect on Aβ dimer. By comparing the free-energy landscapes of naproxen interactions with Aβ dimers and fibrils, we conclude that this ligand has stronger antiaggregation potential against Aβ fibrils rather than against dimers. The analysis of naproxen binding energetics shows that the location of ligand binding sites in Aβ dimer is dictated by the Aβ amino acid sequence. Comparison of the in silico findings with experimental observations reveals potential limitations of naproxen as an effective therapeutic agent in the treatment of Alzheimer's disease.

Indexed as

Alzheimer DiseaseAmino Acid SequenceAmyloid beta-PeptidesAnti-Inflammatory AgentsLigandsMolecular Dynamics SimulationMolecular Sequence DataNaproxenPeptide FragmentsProtein MultimerizationProtein StabilityProtein Structure, SecondarySolventsThermodynamicsAmyloid beta-Peptidesamyloid beta-protein (1-40)Anti-Inflammatory AgentsLigandsNaproxenPeptide FragmentsSolvents

Identifiers

PMID21504739
PMCPMC3077692
OpenAlexW2079991717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.