Evidence map›Paper›PMID 21499728›Full record

ArticleEndocrine pathology2011

Tumor heterogeneity in a follicular carcinoma of thyroid: a study by comparative genomic hybridization.

Leonard Da Silva, Daniel James, Peter T Simpson, Daniel Walker, Ana Cristina Vargas, Janani Jayanthan, Sunil R Lakhani, Anne Marie McNicol

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Endocrine pathology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Leonard Da SilvaThe University of Queensland, UQ Centre for Clinical Research, Herston, Building 918/B71, Royal Brisbane and Women's Hospital, Herston, QLD, 4029, Australia.
Daniel James
Peter T Simpson
Daniel Walker
Ana Cristina Vargas
Janani Jayanthan
Sunil R Lakhani
Anne Marie McNicol
Royal Brisbane and Women's Hospital · AUUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report a follicular carcinoma of thyroid that showed a range of histologic appearances, with microfollicular, macrofollicular/pseudopapillary, oncocytic, and poorly differentiated areas. We used comparative genomic hybridization to detect the major DNA copy number changes in each component, in order to study the inter-relationships among them. All showed gains in 11q and 17q, suggesting that these were early events in the development of the tumor, and these were the only changes in the follicular component. The other components each showed additional gains and losses, some unique to one component. The oncocytic component showed most changes, including loss on 16q in the region of the E-cadherin gene. This was associated with reduced intensity of immunostaining for E-cadherin specifically in that component. No mutations in the E-cadherin gene were detected in this component. The demonstration that some DNA copy number changes are consistent across each component suggests that they are all clonally related. The additional chromosomal and immunohistochemical heterogeneity across the macrofollicular/pseudopapillary, oncocytic, and poorly differentiated components would be consistent with the emergence of subclones, possibly as part of tumor progression.

Indexed as

Gene DosageAdenocarcinoma, FollicularBiomarkers, TumorCadherinsChromosomes, Human, Pair 16Comparative Genomic HybridizationDisease ProgressionDNA Copy Number VariationsGene Expression ProfilingHumansMaleMiddle AgedSequence Analysis, DNAThyroid NeoplasmsBiomarkers, TumorCadherins

Identifiers

PMID21499728
OpenAlexW2053716098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.