Evidence map›Paper›PMID 21498544›Full record

ArticleNucleic acids research2011

Mediator head subcomplex Med11/22 contains a common helix bundle building block with a specific function in transcription initiation complex stabilization.

Martin Seizl, Laurent Larivière, Toni Pfaffeneder, Larissa Wenzeck, Patrick Cramer

Abstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Article
  3. Translational regulation contributes to the elevated COThe Plant journal : for cell and molecular biology · 2020
    Article
  4. Article
  5. Review
  6. Twenty years of Mediator complex structural studies.Biochemical Society transactions · 2019
    Review
  7. Transcription regulation by the Mediator complex.Nature reviews. Molecular cell biology · 2018
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. The Mediator complex: a central integrator of transcription.Nature reviews. Molecular cell biology · 2015
    Review
  13. Article
  14. Article
  15. Disordered proteinaceous machines.Chemical reviews · 2014
    Review
  16. Article
  17. Article
  18. Review
  19. Mechanisms of Mediator complex action in transcriptional activation.Cellular and molecular life sciences : CMLS · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Martin SeizlGene Center and Department of Biochemistry, Center for Integrated Protein Science Munich, Ludwig-Maximilians-Universität München, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.
Laurent Larivière
Toni Pfaffeneder
Larissa Wenzeck
Patrick Cramer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mediator is a multiprotein co-activator of RNA polymerase (Pol) II transcription. Mediator contains a conserved core that comprises the 'head' and 'middle' modules. We present here a structure-function analysis of the essential Med11/22 heterodimer, a part of the head module. Med11/22 forms a conserved four-helix bundle domain with C-terminal extensions, which bind the central head subunit Med17. A highly conserved patch on the bundle surface is required for stable transcription pre-initiation complex formation on a Pol II promoter in vitro and in vivo and may recruit the general transcription factor TFIIH. The bundle domain fold is also present in the Mediator middle module subcomplex Med7/21 and is predicted in the Mediator heterodimers Med2/3, Med4/9, Med10/14 and Med28/30. The bundle domain thus represents a common building block that has been multiplied and functionally diversified during Mediator evolution in eukaryotes.

Indexed as

Transcription, GeneticAmino Acid SequenceMediator ComplexMolecular Sequence DataMutationProtein Structure, SecondaryProtein Structure, TertiaryRNA Polymerase IISaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsSequence AlignmentMed11 protein, S cerevisiaeMediator ComplexRNA Polymerase IISaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsSRB4 protein, S cerevisiaeSRB6 protein, S cerevisiae

Identifiers

PMID21498544
PMCPMC3152362

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.