Evidence map›Paper›PMID 21497341›Full record

SynthesisFertility and sterility2011

High-density fine-mapping of a chromosome 10q26 linkage peak suggests association between endometriosis and variants close to CYP2C19.

Jodie N Painter, Dale R Nyholt, Andrew Morris, Zhen Z Zhao, Anjali K Henders, Ann Lambert, Leanne Wallace, Nicholas G Martin, Stephen H Kennedy, Susan A Treloar and 2 more

Open access · bronzeAbstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in Fertility and sterility, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Endometriosis.Endocrine reviews · 2019
    Review
  11. Defining the genetic profile of endometriosis.Experimental and therapeutic medicine · 2019
    Review
  12. Review
  13. KNOWLEDGE DRIVEN BINNING AND PHEWAS ANALYSIS IN MARSHFIELD PERSONALIZED MEDICINE RESEARCH PROJECT USING BIOBIN.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2016
    Article
  14. Article
  15. Article
  16. CYP2C19 polymorphism increases the risk of endometriosis.Journal of assisted reproduction and genetics · 2015
    Article
  17. Article
  18. Fine mapping of variants associated with endometriosis in the WNT4 region on chromosome 1p36.International journal of molecular epidemiology and genetics · 2013
    Article
  19. Article
  20. Insights into Assessing the Genetics of Endometriosis.Current obstetrics and gynecology reports · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Jodie N PainterQueensland Institute of Medical Research, Brisbane, Queensland, Australia. jodie.painter@qimr.edu.au
Dale R Nyholt
Andrew Morris
Zhen Z Zhao
Anjali K Henders
Ann Lambert
Leanne Wallace
Nicholas G Martin
Stephen H Kennedy
Susan A Treloar
Krina T Zondervan
Grant W Montgomery
QIMR Berghofer Medical Research Institute · AUUniversity of Oxford · GBCentre for Human Genetics · GBJohn Radcliffe Hospital · GBUniversity of Queensland · AU

Funding

Identifying Susceptibility Genes for EndometriosisR01HD050537 · NICHD · QUEENSLAND INSTITUTE OF MEDICAL RESEARCH · PI MONTGOMERY, GRANT W · 2006 to 2009
$1.5M
NICHD NIH HHS R01 HD050537NICHD NIH HHS R01HD50537Wellcome Trust 076113Wellcome Trust 081682Wellcome Trust 084766Wellcome Trust 085235Wellcome Trust 085475Wellcome Trust 090532Wellcome Trust WT081682/Z/06/ZWellcome Trust WT084766/Z/08/ZWellcome Trust WT085235/Z/08/Z
6 · The paper itself

Abstract

objectiveTo refine a previously reported linkage peak for endometriosis on chromosome 10q26, and conduct follow-up analyses and a fine-mapping association study across the region to identify new candidate genes for endometriosis.

designCase-control study.

settingAcademic research. PATIENT(S): Cases=3,223 women with surgically confirmed endometriosis; controls=1,190 women without endometriosis and 7,060 population samples. INTERVENTION(S): Analysis of 11,984 single nucleotide polymorphisms on chromosome 10. MAIN OUTCOME MEASURE(S): Allele frequency differences between cases and controls. RESULT(S): Linkage analyses on families grouped by endometriosis symptoms (primarily subfertility) provided increased evidence for linkage (logarithm of odds score=3.62) near a previously reported linkage peak. Three independent association signals were found at 96.59 Mb (rs11592737), 105.63 Mb (rs1253130), and 124.25 Mb (rs2250804). Analyses including only samples from linkage families supported the association at all three regions. However, only rs11592737 in the cytochrome P450 subfamily C (CYP2C19) gene was replicated in an independent sample of 2,079 cases and 7,060 population controls. CONCLUSION(S): The role of the CYP2C19 gene in conferring risk for endometriosis warrants further investigation.

Indexed as

Chromosome MappingChromosomes, Human, Pair 10Genetic LinkagePolymorphism, Single NucleotideAryl Hydrocarbon HydroxylasesCase-Control StudiesCytochrome P-450 CYP2C19EndometriosisEnglandFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseHumansOdds RatioPhenotypeAryl Hydrocarbon HydroxylasesCYP2C19 protein, humanCytochrome P-450 CYP2C19

Identifiers

PMID21497341
PMCPMC3125525
OpenAlexW2114614134

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.