Evidence map›Paper›PMID 21496645›Full record

ArticleCell2011

Single-molecule protein unfolding and translocation by an ATP-fueled proteolytic machine.

Marie-Eve Aubin-Tam, Adrian O Olivares, Robert T Sauer, Tania A Baker, Matthew J Lang

Abstract read
In one paragraph

Article in Cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  13. Real-time capture of σNature communications · 2025
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95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Marie-Eve Aubin-TamDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Adrian O Olivares
Robert T Sauer
Tania A Baker
Matthew J Lang

Funding

Sequence Determinants of Protein Structure and StabilityR37AI015706 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAUER, ROBERT T · 2002 to 2011
$4.7M
Sequence Determinants of Protein Structure and StabilityR01GM101988 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAUER, ROBERT T · 2012 to 2019
$3.5M
VIRAL PROTEINS: STRUCTURE AND ASSEMBLY PATHWAYSR01AI015706 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAUER, ROBERT T · 1985 to 2001
$693k
Defining AAA+ enzyme function in bacterial secretionF32AI082929 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI OLIVARES, ADRIAN OTHONIEL · 2009 to 2010
$98k
Howard Hughes Medical InstituteNIAID NIH HHS AI-15706NIAID NIH HHS AI-82929NIAID NIH HHS F32 AI082929NIAID NIH HHS R01 AI015706NIAID NIH HHS R37 AI015706NIGMS NIH HHS R01 GM101988
6 · The paper itself

Abstract

All cells employ ATP-powered proteases for protein-quality control and regulation. In the ClpXP protease, ClpX is a AAA+ machine that recognizes specific protein substrates, unfolds these molecules, and then translocates the denatured polypeptide through a central pore and into ClpP for degradation. Here, we use optical-trapping nanometry to probe the mechanics of enzymatic unfolding and translocation of single molecules of a multidomain substrate. Our experiments demonstrate the capacity of ClpXP and ClpX to perform mechanical work under load, reveal very fast and highly cooperative unfolding of individual substrate domains, suggest a translocation step size of 5-8 amino acids, and support a power-stroke model of denaturation in which successful enzyme-mediated unfolding of stable domains requires coincidence between mechanical pulling by the enzyme and a transient stochastic reduction in protein stability. We anticipate that single-molecule studies of the mechanical properties of other AAA+ proteolytic machines will reveal many shared features with ClpXP.

Indexed as

Protein UnfoldingAdenosine TriphosphateEndopeptidase ClpEscherichia coliHumansProtein TransportAdenosine TriphosphateEndopeptidase Clp

Identifiers

PMID21496645
PMCPMC3108460

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.