Contrast Response Functions for Single Gabor Patches: ROI-Based Analysis Over-Represents Low-Contrast Patches for GE BOLD.

important for the interpretation of bold fmri data is a linear relationship between the bold response and the underlying neural activityincreased BOLD responses should reflect proportionate increases in the underlying neural activity. While previous studies have demonstrated a linear relationship between the peak amplitude of the BOLD response and neural activity in primary visual cortex (V1), these studies have used stimuli that excite large areas of cortex, and the linearity of the BOLD response has not been demonstrated when only a small patch of cortex is stimulated. The BOLD response to isolated Gabor patches of increasing contrast was measured with gradient echo (GE) BOLD and spin echo (SE) BOLD at 7 T. Our primary finding is notable spatial heterogeneity of the BOLD contrast response, particularly for the GE BOLD data, resulting in a more reliably linear relationship between BOLD data and estimated neural responses in the center of the cortical representations of the individual Gabor patches than near the edges. A control experiment with larger sinusoidal grating patches confirms that the observed sensitivity to voxel selection in the regions of interest-based analysis is unique to the small stimuli.