Evidence map›Paper›PMID 21483023›Full record

ArticleJournal of the National Cancer Institute2011

Genome-wide association study of survival in non-small cell lung cancer patients receiving platinum-based chemotherapy.

Xifeng Wu, Yuanqing Ye, Rafael Rosell, Christopher I Amos, David J Stewart, Michelle A T Hildebrandt, Jack A Roth, John D Minna, Jian Gu, Jie Lin and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the National Cancer Institute, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 3 pooled it
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 3 syntheses or guidelines pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
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  6. Review
  7. Article
  8. Article
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  11. Article
  12. Polymorphisms inInternational journal of molecular sciences · 2021
    Article
  13. Genetic Determinants of Lung Cancer Prognosis in Never Smokers: A Pooled Analysis in the International Lung Cancer Consortium.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Article
  14. Chemerin and Cancer.International journal of molecular sciences · 2019
    Review
  15. Investigation of Leukocyte Telomere Length and Genetic Variants in Chromosome 5p15.33 as Prognostic Markers in Lung Cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. A Decade of GWAS Results in Lung Cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 2 countries.

Xifeng WuDepartment of Epidemiology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd, Unit 1340, Houston, TX 77030, USA. xwu@mdanderson.org
Yuanqing Ye
Rafael Rosell
Christopher I Amos
David J Stewart
Michelle A T Hildebrandt
Jack A Roth
John D Minna
Jian Gu
Jie Lin
Shama C Buch
Tomoko Nukui
Jose Luis Ramirez Serrano
Miquel Taron
Adrian Cassidy
Charles Lu
Joe Y Chang
Scott M Lippman
Waun Ki Hong
Margaret R Spitz
Marjorie Romkes
Ping Yang
The University of Texas MD Anderson Cancer Center · USHospital Universitari Germans Trias i Pujol · ESInstitut Català d'Oncologia · ESUniversitat Autònoma de Barcelona · ESMayo Clinic · USThe University of Texas Southwestern Medical Center · USUPMC Hillman Cancer Center · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
Vitamin D3 Modulation of Inflammation and Lung Cancer RiskP50CA090440 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DACIC, SANJA · 2001 to 2015
$34.6M
Molecular Signatures of Lung CancerU01CA114771 · NCI · VANDERBILT UNIVERSITY · PI CARBONE, DAVID P. · 2005 to 2010
$8.7M
ECOGENETIC STUDY OF LUNG CANCER IN MINORITIESR01CA055769 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 1991 to 2008
$5.3M
Training Program in Biostatistics for Cancer ResearchT32CA096520 · NCI · RICE UNIVERSITY · PI KIMMEL, MAREK, YUAN, YING · 2003 to 2023
$4.5M
Genetic Determinants of Lung Cancer SurvivalR01CA084354 · NCI · MAYO CLINIC ROCHESTER · PI YANG, PING · 2001 to 2012
$4.0M
High Density Association Analysis of Lung CancerR01CA121197 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I. · 2007 to 2010
$3.0M
Lung Cancer Chemoradiation: Predictors of SurvivalR01CA111646 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WU, XIFENG · 2005 to 2009
$2.9M
Health and QOL among Long-Term Lung Cancer SurvivorsR01CA115857 · NCI · MAYO CLINIC ROCHESTER · PI YANG, PING · 2006 to 2010
$2.4M
NCI NIH HHS 5U01CA114771NCI NIH HHS P50 CA070907NCI NIH HHS P50CA070907NCI NIH HHS P50 CA090440NCI NIH HHS P50CA090440NCI NIH HHS R01 CA055769NCI NIH HHS R01 CA084354NCI NIH HHS R01CA084354NCI NIH HHS R01 CA111646NCI NIH HHS R01CA111646NCI NIH HHS R01 CA115857NCI NIH HHS R01CA115857NCI NIH HHS R01 CA121197NCI NIH HHS R01CA121197NCI NIH HHS R01CA55769NCI NIH HHS T32 CA096520NCI NIH HHS U01 CA114771
6 · The paper itself

Abstract

backgroundInterindividual variation in genetic background may influence the response to chemotherapy and overall survival for patients with advanced-stage non-small cell lung cancer (NSCLC).

methodsTo identify genetic variants associated with poor overall survival in these patients, we conducted a genome-wide scan of 307,260 single-nucleotide polymorphisms (SNPs) in 327 advanced-stage NSCLC patients who received platinum-based chemotherapy with or without radiation at the University of Texas MD Anderson Cancer Center (the discovery population). A fast-track replication was performed for 315 patients from the Mayo Clinic followed by a second validation at the University of Pittsburgh in 420 patients enrolled in the Spanish Lung Cancer Group PLATAX clinical trial. A pooled analysis combining the Mayo Clinic and PLATAX populations or all three populations was also used to validate the results. We assessed the association of each SNP with overall survival by multivariable Cox proportional hazard regression analysis. All statistical tests were two-sided.

resultsSNP rs1878022 in the chemokine-like receptor 1 (CMKLR1) was statistically significantly associated with poor overall survival in the MD Anderson discovery population (hazard ratio [HR] of death = 1.59, 95% confidence interval [CI] = 1.32 to 1.92, P = 1.42 × 10(-6)), in the PLATAX clinical trial (HR of death = 1.23, 95% CI = 1.00 to 1.51, P = .05), in the pooled Mayo Clinic and PLATAX validation (HR of death = 1.22, 95% CI = 1.06 to 1.40, P = .005), and in pooled analysis of all three populations (HR of death = 1.33, 95% CI = 1.19 to 1.48, P = 5.13 × 10(-7)). Carrying a variant genotype of rs10937823 was associated with decreased overall survival (HR of death = 1.82, 95% CI = 1.42 to 2.33, P = 1.73 × 10(-6)) in the pooled MD Anderson and Mayo Clinic populations but not in the PLATAX trial patient population (HR of death = 0.96, 95% CI = 0.69 to 1.35).

conclusionThese results have the potential to contribute to the future development of personalized chemotherapy treatments for individual NSCLC patients.

Indexed as

Polymorphism, Single NucleotideAdultAgedAged, 80 and overAntineoplastic Combined Chemotherapy ProtocolsArea Under CurveCarcinoma, Non-Small-Cell LungChemotherapy, AdjuvantFemaleGenome-Wide Association StudyGenotypeHumansKaplan-Meier EstimateLinkage DisequilibriumLung NeoplasmsMaleCMKLR1 protein, humanOrganoplatinum CompoundsReceptors, Chemokine

Identifiers

PMID21483023
PMCPMC3096796
OpenAlexW2097805950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.