Evidence map›Paper›PMID 21482792›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Generation of targeted Chlamydia trachomatis null mutants.

Laszlo Kari, Morgan M Goheen, Linnell B Randall, Lacey D Taylor, John H Carlson, William M Whitmire, Dezso Virok, Krithika Rajaram, Valeria Endresz, Grant McClarty and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
  2. Review
  3. EMS Mutation and SNP Detection in IntracellularbioRxiv : the preprint server for biology · 2026
    Article
  4. Complete deletion of theInfection and immunity · 2025
    Article
  5. Journal of bacteriology · 2025
    Review
  6. Article
  7. Article
  8. Review
  9. Metabolism and physiology of pathogenic bacterial obligate intracellular parasites.Frontiers in cellular and infection microbiology · 2024
    Review
  10. Article
  11. Review
  12. Article
  13. Advances in genetic manipulation ofFrontiers in immunology · 2023
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Laszlo KariLaboratory of Intracellular Parasites, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA. karil@niaid.nih.gov
Morgan M Goheen
Linnell B Randall
Lacey D Taylor
John H Carlson
William M Whitmire
Dezso Virok
Krithika Rajaram
Valeria Endresz
Grant McClarty
David E Nelson
Harlan D Caldwell
National Institutes of Health · USNational Institute of Allergy and Infectious Diseases · USIndiana University Bloomington · USUniversity of Szeged · HUUniversity of Manitoba · CA

Funding

Pathogensis of Chlamydial InfectionZIAAI000845 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CALDWELL, HARLAN D · 2009 to 2022
$14.8M
Chlamydial Immunity and Vaccine DevelopmentZIAAI000672 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CALDWELL, HARLAN D · 2009 to 2016
$6.8M
CAP: Trachoma VaccineZIAAI001161 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CALDWELL, HARLAN D · 2012 to 2012
$269k
Intramural NIH HHS
6 · The paper itself

Abstract

Chlamydia trachomatis is an obligate intracellular bacterial pathogen that infects hundreds of millions of individuals globally, causing blinding trachoma and sexually transmitted disease. More effective chlamydial control measures are needed, but progress toward this end has been severely hampered by the lack of a tenable chlamydial genetic system. Here, we describe a reverse-genetic approach to create isogenic C. trachomatis mutants. C. trachomatis was subjected to low-level ethyl methanesulfonate mutagenesis to generate chlamydiae that contained less then one mutation per genome. Mutagenized organisms were expanded in small subpopulations that were screened for mutations by digesting denatured and reannealed PCR amplicons of the target gene with the mismatch specific endonuclease CEL I. Subpopulations with mutations were then sequenced for the target region and plaque-cloned if the desired mutation was detected. We demonstrate the utility of this approach by isolating a tryptophan synthase gene (trpB) null mutant that was otherwise isogenic to its parental clone as shown by de novo genome sequencing. The mutant was incapable of avoiding the anti-microbial effect of IFN-γ-induced tryptophan starvation. The ability to genetically manipulate chlamydiae is a major advancement that will enhance our understanding of chlamydial pathogenesis and accelerate the development of new anti-chlamydial therapeutic control measures. Additionally, this strategy could be applied to other medically important bacterial pathogens with no or difficult genetic systems.

Indexed as

MutagenesisMutationAntineoplastic Agents, AlkylatingChlamydia InfectionsChlamydia trachomatisEthyl MethanesulfonateHumansTryptophan SynthaseAntineoplastic Agents, AlkylatingEthyl MethanesulfonateTryptophan Synthase

Identifiers

PMID21482792
PMCPMC3084044
OpenAlexW2119766894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.