Evidence map›Paper›PMID 21482675›Full record

SynthesisCancer research2011

LIN28B polymorphisms influence susceptibility to epithelial ovarian cancer.

Jennifer Permuth-Wey, Donghwa Kim, Ya-Yu Tsai, Hui-Yi Lin, Y Ann Chen, Jill Barnholtz-Sloan, Michael J Birrer, Gregory Bloom, Stephen J Chanock, Zhihua Chen and 36 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Cancer research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 4 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 4 syntheses or guidelines pooled it, 83 citations in OpenAlex.

  1. Pooled it
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  14. A nanobody targeting the LIN28:let-7 interaction fragment of TUT4 blocks uridylation of let-7.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Article
  17. Journal of Cancer · 2020
    Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

46 authors at 4 institutions in 1 country.

Jennifer Permuth-WeyCancer Epidemiology Program, Division of Population Sciences, Moffitt Cancer Center, Tampa, Florida, USA.
Donghwa Kim
Ya-Yu Tsai
Hui-Yi Lin
Y Ann Chen
Jill Barnholtz-Sloan
Michael J Birrer
Gregory Bloom
Stephen J Chanock
Zhihua Chen
Daniel W Cramer
Julie M Cunningham
Getachew Dagne
Judith Ebbert-Syfrett
David Fenstermacher
Brooke L Fridley
Montserrat Garcia-Closas
Simon A Gayther
William Ge
Aleksandra Gentry-Maharaj
Jesus Gonzalez-Bosquet
Ellen L Goode
Edwin Iversen
Heather Jim
William Kong
John McLaughlin
Usha Menon
Alvaro N A Monteiro
Steven A Narod
Paul D P Pharoah
Catherine M Phelan
Xiaotao Qu
Susan J Ramus
Harvey Risch
Joellen M Schildkraut
Honglin Song
Heather Stockwell
Rebecca Sutphen
Kathryn L Terry
Jonathan Tyrer
Robert A Vierkant
Nicolas Wentzensen
Johnathan M Lancaster
Jin Q Cheng
Thomas A Sellers
Ovarian Cancer Association Consortium
Moffitt Cancer Center · USMayo Clinic · USUniversity of South Florida · USBreakthrough · US

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI AKHILESH PANDEY · 1985 to 2026
$151.3M
Hormone-Related CancersZIACP010126 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI GIERACH, GRETCHEN · 2009 to 2025
$103.5M
TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI Christine O'Connell · 1998 to 2026
$93.5M
Use of microfluidic tumor cultures to enable clinical trials of therapies for ovarian cancerP50CA136393 · NCI · MAYO CLINIC ROCHESTER · PI ELLEN L. GOODE · 2009 to 2026
$37.0M
Novel Serum, Plasma, and Urine Biomarkers of Ovarian CanP50CA105009 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI CRAMER, DANIEL WILLIAM · 2004 to 2010
$13.3M
Haplotype-Based Genome Screen for Ovarian Cancer LociR01CA114343 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI SELLERS, THOMAS A · 2007 to 2011
$7.5M
The Molecular Epidemiology Of Ovarian CancerR01CA076016 · NCI · DUKE UNIVERSITY · PI SCHILDKRAUT, JOELLEN M. · 1998 to 2010
$6.2M
OVARIAN CANCER RISK AND HYPERGONADOTROPIC HYPOGONADISMR01CA054419 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI CRAMER, DANIEL WILLIAM · 1992 to 2007
$5.9M
Population-Based Analysis of Ovarian Cancer BiomarkersR01CA106414 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI SUTPHEN, REBECCA · 2005 to 2009
$3.0M
Genetic Variation in the NF-kappaB Pathway and Ovarian Cancer EtiologyR01CA122443 · NCI · MAYO CLINIC ROCHESTER · PI GOODE, ELLEN L. · 2007 to 2012
$2.7M
RISK FACTOR ANALYSIS OF BRCA1 AND BRCA2 CARRIERSR01CA063678 · NCI · UNIVERSITY OF TORONTO · PI NAROD, STEVEN A · 1994 to 1999
–
GENETIC/EPIDEMIOLOGY STUDY OF EPITHELIAL OVARIAN TUMORSR01CA063682 · NCI · YALE UNIVERSITY · PI RISCH, HARVEY A · 1994 to 1998
–
Cancer Research UK 10119Cancer Research UK 10124Cancer Research UK A10119Cancer Research UK A10124Department of HealthIntramural NIH HHSMedical Research Council G0801875NCI NIH HHS CA-54419NCI NIH HHS P30 CA015083NCI NIH HHS P30 CA076292NCI NIH HHS P30-CA0762-92NCI NIH HHS P30-CA-15083NCI NIH HHS P50 CA105009NCI NIH HHS P50 CA136393NCI NIH HHS P50-CA-136393NCI NIH HHS R01 CA054419NCI NIH HHS R01 CA063678NCI NIH HHS R01 CA063682NCI NIH HHS R01 CA076016NCI NIH HHS R01 CA106414NCI NIH HHS R01-CA-106414NCI NIH HHS R01 CA114343NCI NIH HHS R01-CA-114343NCI NIH HHS R01-CA114343-S1NCI NIH HHS R01 CA122443NCI NIH HHS R01-CA-122443NCI NIH HHS R01-CA-63678NCI NIH HHS R01-CA-63682NCI NIH HHS R01-CA-76016Wellcome Trust
6 · The paper itself

Abstract

Defective microRNA (miRNA) biogenesis contributes to the development and progression of epithelial ovarian cancer (EOC). In this study, we examined the hypothesis that single nucleotide polymorphisms (SNP) in miRNA biogenesis genes may influence EOC risk. In an initial investigation, 318 SNPs in 18 genes were evaluated among 1,815 EOC cases and 1,900 controls, followed up by a replicative joint meta-analysis of data from an additional 2,172 cases and 3,052 controls. Of 23 SNPs from 9 genes associated with risk (empirical P < 0.05) in the initial investigation, the meta-analysis replicated 6 SNPs from the DROSHA, FMR1, LIN28, and LIN28B genes, including rs12194974 (G>A), an SNP in a putative transcription factor binding site in the LIN28B promoter region (summary OR = 0.90, 95% CI: 0.82-0.98; P = 0.015) which has been recently implicated in age of menarche and other phenotypes. Consistent with reports that LIN28B overexpression in EOC contributes to tumorigenesis by repressing tumor suppressor let-7 expression, we provide data from luciferase reporter assays and quantitative RT-PCR to suggest that the inverse association among rs12194974 A allele carriers may be because of reduced LIN28B expression. Our findings suggest that variants in LIN28B and possibly other miRNA biogenesis genes may influence EOC susceptibility.

Indexed as

AdenocarcinomaAllelesCarcinoma, Ovarian EpithelialCase-Control StudiesCell Line, TumorDNA-Binding ProteinsDNA, NeoplasmFemaleGenetic Predisposition to DiseaseHumansMicroRNAsMiddle AgedNeoplasms, Glandular and EpithelialOvarian NeoplasmsPolymorphism, Single NucleotideRNA-Binding ProteinsDNA-Binding ProteinsDNA, NeoplasmLIN28B protein, humanMicroRNAsRNA-Binding Proteins

Identifiers

PMID21482675
PMCPMC3107389
OpenAlexW2114896726

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.