Evidence map›Paper›PMID 21479579›Full record

ArticleJournal of plant research2012

Protein dynamics during seed germination under copper stress in Arabidopsis over-expressing Potentilla superoxide dismutase.

Tejpal Gill, Vivek Dogra, Sanjay Kumar, Paramvir Singh Ahuja, Yelam Sreenivasulu

Abstract read
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In one paragraph

Article in Journal of plant research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  11. Article
  12. Plant proteomics in India and Nepal: current status and challenges ahead.Physiology and molecular biology of plants : an international journal of functional plant biology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tejpal GillBiotechnology Division, Institute of Himalayan Bioresource Technology (Council of Scientific and Industrial Research), Palampur, 176061, Himachal Pradesh, India.
Vivek Dogra
Sanjay Kumar
Paramvir Singh Ahuja
Yelam Sreenivasulu
Institute of Himalayan Bioresource Technology · INCouncil of Scientific and Industrial Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copper (Cu), though an essential micronutrient for plants, poses toxicity at higher concentrations possibly by inducing oxidative stress. With the background that enzyme superoxide dismutase (SOD) ameliorates oxidative stress, the present work focused on understanding physiological and proteomic response of Arabidopsis seeds constitutively over-expressing copper-zinc SOD of Potentilla atrosanguinea (PaSOD) during germination in response to varied concentrations of copper sulphate (Cu stress). Transgenics showed higher germination percentage and required less "mean time to germination" under Cu-stress. In response to Cu stress, 39 differentially expressed protein spots were detected by 2-D electrophoresis in proteins of germinating wild type (WT) and transgenic seeds, of which 14 spots appeared exclusively in transgenics. Among the rest 25 protein spots, 14 showed down-regulation, one showed up-regulation, and 10 spots disappeared. MALDI-TOF and subsequent peptide mass fingerprinting analysis revealed that the down-regulated proteins in transgenics were related to oxidative stress, detoxification, germination, intermediary metabolism and regulatory proteins. Up-regulated proteins in WT and down-regulated proteins in transgenic during Cu stress were the same. Changes in key proteins, vis-à-vis alleviation of oxidative stress in transgenic Arabidopsis over-expressing PaSOD possibly alleviated toxicity of Cu-induced stress during seed germination, resulting in higher germination rate and germination percentage.

Indexed as

Adaptation, PhysiologicalArabidopsisArabidopsis ProteinsCopperCopper SulfateElectrophoresis, Gel, Two-DimensionalGene Expression Regulation, PlantGerminationPlants, Genetically ModifiedPotentillaReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionSeedsStress, PhysiologicalSuperoxide DismutaseTime FactorsArabidopsis ProteinsCopperCopper SulfateSuperoxide Dismutase

Identifiers

PMID21479579
OpenAlexW2093739006

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.