Evidence map›Paper›PMID 21479234›Full record

ArticlePloS one2011

BRAF V600E mutations are common in pleomorphic xanthoastrocytoma: diagnostic and therapeutic implications.

Dora Dias-Santagata, Quynh Lam, Kathy Vernovsky, Natalie Vena, Jochen K Lennerz, Darrell R Borger, Tracy T Batchelor, Keith L Ligon, A John Iafrate, Azra H Ligon and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 139 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
139citing papers in PubMed, 1 pooled it
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

139 citing papers in PubMed, 1 synthesis or guideline pooled it, 308 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. BRAF Inhibition inJournal of clinical oncology : official journal of the American Society of Clinical Oncology · 2018
    Trial
  4. Intraoperative mass spectrometry mapping of an onco-metabolite to guide brain tumor surgery.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Trial
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Pediatric-Like Brain Tumors in Adults.Advances and technical standards in neurosurgery · 2024
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Metabolic Rewiring in Adult-Type Diffuse Gliomas.International journal of molecular sciences · 2023
    Review
  20. Review

79 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Dora Dias-SantagataDepartment of Pathology and Center for Cancer Research, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America. ssantagata@partners.org
Quynh Lam
Kathy Vernovsky
Natalie Vena
Jochen K Lennerz
Darrell R Borger
Tracy T Batchelor
Keith L Ligon
A John Iafrate
Azra H Ligon
David N Louis
Sandro Santagata
Harvard University · USCenter for Cancer Research · USDana-Farber Cancer Institute · USBoston Children's Hospital · USMassachusetts General Hospital · US

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHIN, LYNDA · 2003 to 2012
$20.3M
TOWARD A MOLECULAR CLASSIFICATION OF HUMAN GLIOMASR01CA057683 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LOUIS, DAVID N · 1992 to 2013
$4.7M
Heat Shock Directed Drug Discovery For The Treatment Of GliomasK08NS064168 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI SANTAGATA, SANDRO · 2008 to 2012
$900k
NCI NIH HHS CA095616NCI NIH HHS CA57683NCI NIH HHS P01 CA095616NCI NIH HHS R01 CA057683NINDS NIH HHS K08 NS064168NINDS NIH HHS K08NS064168
6 · The paper itself

Abstract

Pleomorphic xanthoastrocytoma (PXA) is low-grade glial neoplasm principally affecting children and young adults. Approximately 40% of PXA are reported to recur within 10 years of primary resection. Upon recurrence, patients receive radiation therapy and conventional chemotherapeutics designed for high-grade gliomas. Genetic changes that can be targeted by selective therapeutics have not been extensively evaluated in PXA and ancillary diagnostic tests to help discriminate PXA from other pleomorphic and often more aggressive astrocytic malignancies are limited. In this study, we apply the SNaPshot multiplexed targeted sequencing platform in the analysis of brain tumors to interrogate 60 genetic loci that are frequently mutated in 15 cancer genes. In our analysis we detect BRAF V600E mutations in 12 of 20 (60%) WHO grade II PXA, in 1 of 6 (17%) PXA with anaplasia and in 1 glioblastoma arising in a PXA. Phospho-ERK was detected in all tumors independent of the BRAF mutation status. BRAF duplication was not detected in any of the PXA cases. BRAF V600E mutations were identified in only 2 of 71 (2.8%) glioblastoma (GBM) analyzed, including 1 of 9 (11.1%) giant cell GBM (gcGBM). The finding that BRAF V600E mutations are common in the majority of PXA has important therapeutic implications and may help in differentiating less aggressive PXAs from lethal gcGBMs and GBMs.

Indexed as

AdolescentAdultAstrocytomaBase SequenceChildDNA Mutational AnalysisExtracellular Signal-Regulated MAP KinasesFemaleGenotypeGliomaHumansImmunohistochemistryIn Situ Hybridization, FluorescenceMaleMiddle AgedMolecular Sequence DataBRAF protein, humanExtracellular Signal-Regulated MAP KinasesProto-Oncogene Proteins B-raf

Identifiers

PMID21479234
PMCPMC3066220
OpenAlexW2010760434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.