Evidence map›Paper›PMID 21478550›Full record

ArticleThe Journal of biological chemistry2011

Large scale RNAi screen reveals that the inhibitor of DNA binding 2 (ID2) protein is repressed by p53 family member p63 and functions in human keratinocyte differentiation.

Ning Wu, David Castel, Marie-Anne Debily, Maria Alessandra Vigano, Olivier Alibert, Roberto Mantovani, Kristina Iljin, Paul-Henri Romeo, Xavier Gidrol

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Ning WuCEA, IRTSV, Laboratoire Biopuces, 17 rue des Martyrs, 38054 Grenoble cedex 9, France.
David Castel
Marie-Anne Debily
Maria Alessandra Vigano
Olivier Alibert
Roberto Mantovani
Kristina Iljin
Paul-Henri Romeo
Xavier Gidrol
Commissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversity of Milan · ITUniversité d'Évry Val-d'Essonne · FRUniversity of Turku · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inhibitor of DNA binding 2, dominant negative helix-loop-helix protein, ID2, acts as an oncogene and elevated levels of ID2 have been reported in several malignancies. Whereas some inducers of the ID2 gene have been characterized, little is known regarding the proteins capable to repress its expression. We developed siRNA microarrays to perform a large scale loss-of-function screen in human adult keratinocytes engineered to express GFP under the control of the upstream region of ID2 gene. We screened the effect of siRNA-dependent inhibition of 220 cancer-associated genes on the expression of the ID2::GFP reporter construct. Three genes NBN, RAD21, and p63 lead to a repression of ID2 promoter activity. Strikingly NBN and RAD21 are playing on major role in cell cycle progression and mitosis arrest. These results underline the pregnant need to silence ID2 expression at transcript level to promote cell cycle exit. Central to this inhibitory mechanism we find p63, a key transcription factor in epithelial development and differentiation, which binds specific cis-acting sequence within the ID2 gene promoter both in vitro and in vivo. P63 would not suppress ID2 expression, but would rather prevent excessive expression of that protein to enable the onset of keratinocyte differentiation.

Indexed as

Cell Cycle ProteinsCell DifferentiationDNA-Binding ProteinsGene Expression RegulationHEK293 CellsHumansInhibitor of Differentiation Protein 2KeratinocytesMitosisNuclear ProteinsPhosphoproteinsPromoter Regions, GeneticRNA, Small InterferingTranscription FactorsTumor Suppressor Protein p53Tumor Suppressor ProteinsCell Cycle ProteinsDNA-Binding ProteinsID2 protein, humanInhibitor of Differentiation Protein 2NBN protein, humanNuclear ProteinsPhosphoproteinsRAD21 protein, humanRNA, Small InterferingTP53 protein, humanTP63 protein, humanTranscription FactorsTumor Suppressor Protein p53Tumor Suppressor Proteins

Identifiers

PMID21478550
PMCPMC3121489
OpenAlexW1973550153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.