Evidence map›Paper›PMID 21475591›Full record

ArticleStandards in genomic sciences2011

Complete genome sequence of Truepera radiovictrix type strain (RQ-24).

Natalia Ivanova, Christine Rohde, Christine Munk, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Shweta Deshpande, Jan-Fang Cheng, Roxane Tapia and 25 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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  16. Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Natalia Ivanova
Christine Rohde
Christine Munk
Matt Nolan
Susan Lucas
Tijana Glavina Del Rio
Hope Tice
Shweta Deshpande
Jan-Fang Cheng
Roxane Tapia
Cliff Han
Lynne Goodwin
Sam Pitluck
Konstantinos Liolios
Konstantinos Mavromatis
Natalia Mikhailova
Amrita Pati
Amy Chen
Krishna Palaniappan
Miriam Land
Loren Hauser
Yun-Juan Chang
Cynthia D Jeffries
Evelyne Brambilla
Manfred Rohde
Markus Göker
Brian J Tindall
Tanja Woyke
James Bristow
Jonathan A Eisen
Victor Markowitz
Philip Hugenholtz
Nikos C Kyrpides
Hans-Peter Klenk
Alla Lapidus

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Truepera radiovictrix Albuquerque et al. 2005 is the type species of the genus Truepera within the phylum "Deinococcus/Thermus". T. radiovictrix is of special interest not only because of its isolated phylogenetic location in the order Deinococcales, but also because of its ability to grow under multiple extreme conditions in alkaline, moderately saline, and high temperature habitats. Of particular interest is the fact that, T. radiovictrix is also remarkably resistant to ionizing radiation, a feature it shares with members of the genus Deinococcus. This is the first completed genome sequence of a member of the family Trueperaceae and the fourth type strain genome sequence from a member of the order Deinococcales. The 3,260,398 bp long genome with its 2,994 protein-coding and 52 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Indexed as

aerobicalkaliphilicchemoorganotrophicfacultatively halophilicGEBAGram-indeterminatenon-motileradiation resistantspherical-shapedthermophilicTrueperaceae

Identifiers

PMID21475591
PMCPMC3072082

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.