Evidence map›Paper›PMID 21473777›Full record

ArticleBMC pulmonary medicine2011

The CD4+ T-cell transcriptome and serum IgE in asthma: IL17RB and the role of sex.

Gary M Hunninghake, Jen-hwa Chu, Sunita S Sharma, Michael H Cho, Blanca E Himes, Angela J Rogers, Amy Murphy, Vincent J Carey, Benjamin A Raby

Open access · goldAbstract read
In one paragraph

Article in BMC pulmonary medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Sex-biased Gene Expression Underlies Immune Dysfunction in Asthma.American journal of respiratory cell and molecular biology · 2025
    Pooled it
  2. Trial
  3. Review
  4. Article
  5. Review
  6. Article
  7. Biological Sex As a Critical Variable in CD4Antioxidants & redox signaling · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Gene Expression Profiling in Blood Provides Reproducible Molecular Insights into Asthma Control.American journal of respiratory and critical care medicine · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Vitamin D and asthma.American journal of respiratory and critical care medicine · 2012
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Gary M HunninghakeChanning Laboratory, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA. ghunninghake@partners.org
Jen-hwa Chu
Sunita S Sharma
Michael H Cho
Blanca E Himes
Angela J Rogers
Amy Murphy
Vincent J Carey
Benjamin A Raby
Brigham and Women's Hospital · USHarvard University · US

Funding

THE PHARMACOGENETICS OF ASTHMA TREATMENTU01HL065899 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G, WEISS, SCOTT T · 2000 to 2014
$38.5M
RESEARCH TRAINING-MEDICAL INFORMATICS 90T15LM007092 · NLM · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI Nils Gehlenborg · 1992 to 2026
$32.8M
SYSTEMS APPROACHES TO THE EPIDEMIOLOGY, GENETICS AND GENOMICS OF LUNG DISEASEST32HL007427 · NHLBI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI DAWN L DEMEO, Edwin K Silverman · 1985 to 2026
$13.6M
Statistical GeneticsP01HL083069 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI KLANDERMAN, BARBARA · 2007 to 2011
$12.2M
Genetics and Gene Expression Profiling in AsthmaR01HL086601 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI RABY, BENJAMIN ALEXANDER · 2007 to 2015
$6.8M
CAMP Continuation Study/Phase 3U01HL075419 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI FUHLBRIGGE, ANNE L · 2003 to 2010
$2.0M
Translational Genetics and Genomics of Airways DiseasesK12HL089990 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 2007 to 2012
$1.9M
CLINICAL CENTER FOR CAMPN01HR016049 · HR · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 1991 to 2000
$1.0M
Fine-mapping Association Analysis of Total IgE on Chr. 20p12 in Costa RicansK08HL092222 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNNINGHAKE, GARY MATTHEW · 2008 to 2012
$689k
APPROACHES TO IDENTIFY RARE AND COMMON GENETIC DETERMINANTS IN SEVERE COPDK08HL097029 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI CHO, MICHAEL H. · 2010 to 2013
$548k
INTEGRATIVE GENOMICS AND THE FETAL ORIGINS OF IMPAIRED LUNG FUNCTIONK08HL096833 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SHARMA, SUNITA · 2010 to 2013
$547k
NHLBI NIH HHS K08 HL092222NHLBI NIH HHS K08 HL096833NHLBI NIH HHS K08 HL097029NHLBI NIH HHS K12 HL089990NHLBI NIH HHS N01 HR16049NHLBI NIH HHS P01 HL083069NHLBI NIH HHS R01 HL086601NHLBI NIH HHS T32 HL07427NHLBI NIH HHS U01 HL065899NHLBI NIH HHS U01 HL075419NHLBI NIH HHS U01 HL65899NLM NIH HHS 2T15LM007092-16
6 · The paper itself

Abstract

backgroundThe relationships between total serum IgE levels and gene expression patterns in peripheral blood CD4+ T cells (in all subjects and within each sex specifically) are not known.

methodsPeripheral blood CD4+ T cells from 223 participants from the Childhood Asthma Management Program (CAMP) with simultaneous measurement of IgE. Total RNA was isolated, and expression profiles were generated with Illumina HumanRef8 v2 BeadChip arrays. Modeling of the relationship between genome-wide gene transcript levels and IgE levels was performed in all subjects, and stratified by sex.

resultsAmong all subjects, significant evidence for association between gene transcript abundance and IgE was identified for a single gene, the interleukin 17 receptor B (IL17RB), explaining 12% of the variance (r2) in IgE measurement (p value = 7 × 10(-7), 9 × 10(-3) after adjustment for multiple testing). Sex stratified analyses revealed that the correlation between IL17RB and IgE was restricted to males only (r2 = 0.19, p value = 8 × 10(-8); test for sex-interaction p < 0.05). Significant correlation between gene transcript abundance and IgE level was not found in females. Additionally we demonstrated substantial sex-specific differences in IgE when considering multi-gene models, and in canonical pathway analyses of IgE level.

conclusionsOur results indicate that IL17RB may be the only gene expressed in CD4+ T cells whose transcript measurement is correlated with the variation in IgE level in asthmatics. These results provide further evidence sex may play a role in the genomic regulation of IgE.

Indexed as

AsthmaBronchial Provocation TestsCD4-Positive T-LymphocytesCohort StudiesCross-Sectional StudiesFemaleGene Expression ProfilingGenome-Wide Association StudyHumansImmunoglobulin EMaleOligonucleotide Array Sequence AnalysisReceptors, Interleukin-17Reverse Transcriptase Polymerase Chain ReactionSex CharacteristicsSpirometryImmunoglobulin EReceptors, Interleukin-17

Identifiers

PMID21473777
PMCPMC3080837
OpenAlexW1995634538

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.