Evidence map›Paper›PMID 21473620›Full record

ArticleJournal of the American Chemical Society2011

Characteristics of amyloid-related oligomers revealed by crystal structures of macrocyclic β-sheet mimics.

Cong Liu, Michael R Sawaya, Pin-Nan Cheng, Jing Zheng, James S Nowick, David Eisenberg

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Backbone double-mutant cycle analysis quantifies hydrogen-bond energies in proteins.Protein science : a publication of the Protein Society · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Therapeutic peptides: current applications and future directions.Signal transduction and targeted therapy · 2022
    Review
  6. Review
  7. Article
  8. The biofilm adhesion protein Aap fromThe Journal of biological chemistry · 2020
    Article
  9. Article
  10. Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations.Protein science : a publication of the Protein Society · 2018
    Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Chemical Methods to Knock Down the Amyloid Proteins.Molecules (Basel, Switzerland) · 2017
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Cong LiuUCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095, USA.
Michael R Sawaya
Pin-Nan Cheng
Jing Zheng
James S Nowick
David Eisenberg

Funding

Structural Biology of Amyloid DiseaseR01AG029430 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EISENBERG, DAVID · 2007 to 2016
$3.9M
CHEMICAL MODELS OF PROTEIN BETA SHEET INTERACTIONSR01GM049076 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NOWICK, JAMES S · 1999 to 2009
$1.7M
NEW STRATEGIES FOR FORMATION OF PEPTIDE BETA-SHEETSR29GM049076 · NIGMS · UNIVERSITY OF CALIFORNIA IRVINE · PI NOWICK, JAMES S · 1994 to 1998
–
Howard Hughes Medical InstituteNIA NIH HHS AG-029430NIA NIH HHS R01 AG029430NIGMS NIH HHS GM-49076NIGMS NIH HHS R01 GM049076
6 · The paper itself

Abstract

Protein amyloid oligomers have been strongly linked to amyloid diseases and can be intermediates to amyloid fibers. β-Sheets have been identified in amyloid oligomers. However, because of their transient and highly polymorphic properties, the details of their self-association remain elusive. Here we explore oligomer structure using a model system: macrocyclic peptides. Key amyloidogenic sequences from Aβ and tau were incorporated into macrocycles, thereby restraining them to β-strands, but limiting the growth of the oligomers so they may crystallize and cannot fibrillate. We determined the atomic structures for four such oligomers, and all four reveal tetrameric interfaces in which β-sheet dimers pair together by highly complementary, dry interfaces, analogous to steric zippers found in fibers, suggesting a common structure for amyloid oligomers and fibers. In amyloid fibers, the axes of the paired sheets are either parallel or antiparallel, whereas the oligomeric interfaces display a variety of sheet-to-sheet pairing angles, offering a structural explanation for the heterogeneity of amyloid oligomers.

Indexed as

AmyloidAmyloid beta-PeptidesCrystallography, X-RayHumansMacrocyclic CompoundsModels, MolecularPeptidesProtein MultimerizationProtein Structure, SecondaryAmyloidAmyloid beta-PeptidesMacrocyclic CompoundsPeptides

Identifiers

PMID21473620
PMCPMC3124511

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.