Evidence map›Paper›PMID 21471348›Full record

ArticleJournal of clinical microbiology2011

Application of TaqMan low-density arrays for simultaneous detection of multiple respiratory pathogens.

Maja Kodani, Genyan Yang, Laura M Conklin, Tatiana C Travis, Cynthia G Whitney, Larry J Anderson, Stephanie J Schrag, Thomas H Taylor, Bernard W Beall, Robert F Breiman and 9 more

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 158 papers.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Microbial Detection in Community-Acquired Pleural Space Infections Using the BIOFIRE Joint Infection Panel and Individual Polymerase Chain Reaction Assays.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2026
    Article
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  8. Article
  9. Article
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  11. Design and performance of a real-time RT-PCR assay for detection of influenza C viruses.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2025
    Article
  12. Article
  13. Article
  14. Wastewater Surveillance for Group APathogens (Basel, Switzerland) · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Maja KodaniDivision of Bacterial Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA. MKodani@cdc.gov
Genyan Yang
Laura M Conklin
Tatiana C Travis
Cynthia G Whitney
Larry J Anderson
Stephanie J Schrag
Thomas H Taylor
Bernard W Beall
Robert F Breiman
Daniel R Feikin
M Kariuki Njenga
Leonard W Mayer
M Steven Oberste
Maria Lucia C Tondella
Jonas M Winchell
Stephen L Lindstrom
Dean D Erdman
Barry S Fields

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The large and growing number of viral and bacterial pathogens responsible for respiratory infections poses a challenge for laboratories seeking to provide rapid and comprehensive pathogen identification. We evaluated a novel application of the TaqMan low-density array (TLDA) cards for real-time PCR detection of 21 respiratory-pathogen targets. The performance of the TLDA was compared to that of individual real-time PCR (IRTP) assays with the same primers and probes using (i) nucleic acids extracted from the 21 pathogen strains and 66 closely related viruses and bacteria and (ii) 292 clinical respiratory specimens. With spiked samples, TLDA cards were about 10-fold less sensitive than IRTP assays. By using 292 clinical specimens to generate 2,238 paired individual assays, the TLDA card exhibited 89% sensitivity (95% confidence interval [CI], 86 to 92%; range per target, 47 to 100%) and 98% specificity (95% CI, 97 to 99%; range per target, 85 to 100%) overall compared to IRTP assays as the gold standard with a threshold cycle (C(T)) cutoff of 43. The TLDA card approach offers promise for rapid and simultaneous identification of multiple respiratory pathogens for outbreak investigations and disease surveillance.

Indexed as

BacteriaBacterial InfectionsClinical Laboratory TechniquesHumansMicrofluidicsPolymerase Chain ReactionRespiratory Tract InfectionsSensitivity and SpecificityVirus DiseasesViruses

Identifiers

PMID21471348
PMCPMC3122721

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.