Evidence map›Paper›PMID 21470681›Full record

ArticleEnvironment international2011

Global gene expression and Ingenuity biological functions analysis on PCBs 153 and 138 induced human PBMC in vitro reveals differential mode(s) of action in developing toxicities.

Somiranjan Ghosh, Shizhu Zang, Partha S Mitra, Svetlana Ghimbovschi, Eric P Hoffman, Sisir K Dutta

Open access · greenAbstract read
In one paragraph

Article in Environment international, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

  1. Trial
  2. Article
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  4. Article
  5. Review
  6. Article
  7. Article
  8. Altered Gene Expression in Dioxin-Like and Non-Dioxin-Like PCB Exposed Peripheral Blood Mononuclear Cells.International journal of environmental research and public health · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Biomarkers linking PCB exposure and obesity.Current pharmaceutical biotechnology · 2014
    Review
  14. Status ofInternational journal of human genetics · 2013
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Somiranjan GhoshMolecular Genetics Laboratory, Department of Biology, Howard University, Washington, DC 20059, USA. sghosh@howard.edu
Shizhu Zang
Partha S Mitra
Svetlana Ghimbovschi
Eric P Hoffman
Sisir K Dutta
Howard University · USChildren's National · US

Funding

Early Disease Biomarkers of PCB-exposed Human PopulationU01ES016127 · NIEHS · HOWARD UNIVERSITY · PI DUTTA, SISIR K · 2007 to 2010
$1.7M
NIEHS NIH HHS 1UO1ES016127-01NIEHS NIH HHS U01 ES016127
6 · The paper itself

Abstract

Several reports have indicated that low level of polychlorinated biphenyl (PCB) exposure can adversely affect a multitude of physiological disorders and diseases in in vitro, in vivo, and as reported in epidemiological studies. This investigation is focused on the possible contribution of two most prevalent PCB congeners in vitro in developing toxicities. We used PCBs 138 and 153 at the human equivalence level as model agents to test their specificity in developing toxicities. We chose a global approach using oligonucleotide microarray technology to investigate modulated gene expression for biological effects, upon exposure of PCBs, followed by Ingenuity Pathway Analysis (IPA), to understand the underlying consequence in developing disease and disorders. We performed in vitro studies with human peripheral blood mononuclear cells (PBMC), where PBMC cells were exposed to respective PCBs for 48 h. Overall, our observation on gene expression indicated that PCB produces a unique signature affecting different pathways, specific for each congener. While analyzing these data through IPA, the prominent and interesting disease and disorders were neurological disease, cancer, cardiovascular disease, respiratory disease, as well as endocrine system disorders, genetic disorders, and reproductive system disease. They showed strong resemblances with in vitro, in vivo, and in the epidemiological studies. A distinct difference was observed in renal and urological diseases, organisimal injury and abnormalities, dental disease, ophthalmic disease, and psychological disorders, which are only revealed by PCB 138 exposure, but not in PCB 153. The present study emphasizes the challenges of global gene expression in vitro and was correlated with the results of exposed human population. The microarray results give a molecular mechanistic insight and functional effects, following PCB exposure. The extent of changes in genes related to several possible mode(s) of action highlights the changes in cellular functions and signaling pathways that play major roles. In addition to understanding the pathways related to mode of action for chemicals, these data could lead to the identification of genomic signatures that could be used for screening of chemicals for their potential to cause disease and developmental disorders.

Indexed as

Environmental PollutantsGene ExpressionHSP90 Heat-Shock ProteinsHumansLeukocytes, MononuclearOligonucleotide Array Sequence AnalysisPolychlorinated BiphenylsReactive Oxygen SpeciesSignal Transduction2,2',3',4,4',5-hexachlorobiphenyl2,4,5,2',4',5'-hexachlorobiphenylEnvironmental PollutantsHSP90 Heat-Shock ProteinsPolychlorinated BiphenylsReactive Oxygen SpeciesTRAP1 protein, human

Identifiers

PMID21470681
PMCPMC3097535
OpenAlexW2042185209

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.