Evidence map›Paper›PMID 21468970›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2011

Rapid quantification of cell viability and apoptosis in B-cell lymphoma cultures using cyanine SYTO probes.

Donald Wlodkowic, Joanna Skommer, Zbigniew Darzynkiewicz

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Frontiers in cell and developmental biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Donald WlodkowicThe BioMEMS Research Group, Department of Chemistry, University of Auckland, Auckland 1142, New Zealand. d.wlodkowic@auckland.ac.nz
Joanna Skommer
Zbigniew Darzynkiewicz
Auckland University of Technology · NZ

Funding

PROBES FOR FLOW CYTOMETRYR01CA028704 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI DARZYNKIEWICZ, ZBIGNIEW · 1985 to 2014
$6.0M
Biotechnology and Biological Sciences Research CouncilNCI NIH HHS CA RO1 28 704NCI NIH HHS R01 CA028704
6 · The paper itself

Abstract

The gross majority of classical apoptotic hallmarks can be rapidly examined by multiparameter flow cytometry. As a result, cytometry became a technology of choice in diverse studies of cellular demise. In this context, a novel class of substituted unsymmetrical cyanine SYTO probes has recently become commercially available. Derived from thiazole orange, SYTO display low intrinsic fluorescence, with strong enhancement upon binding to DNA and/or RNA. Broad selection of excitation/emission spectra has recently driven implementation of SYTO dyes in polychromatic protocols with the detection of apoptosis being one of the most prominent applications In this chapter, we outline a handful of commonly used protocols for the assessment of apoptotic events using selected SYTO probes (SYTO 16, 62, 80) in conjunction with common plasma membrane permeability markers (PI, YO-PRO 1, 7-AAD).

Indexed as

ApoptosisBenzoxazolesCell SurvivalCytological TechniquesDactinomycinFluorescent DyesHumansLymphoma, B-CellMolecular ProbesPropidiumQuinolinium CompoundsTumor Cells, Cultured7-aminoactinomycin DBenzoxazolesDactinomycinFluorescent DyesMolecular ProbesPropidiumQuinolinium CompoundsYO-PRO 1

Identifiers

PMID21468970
PMCPMC3238686
OpenAlexW1849466943

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.