ArticleThe Plant cell2011
Unlocking the barley genome by chromosomal and comparative genomics.
Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 215 papers, 1 of them a synthesis that pooled it.
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Who cites it
215 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-QTLs, ortho-meta-QTLs and candidate genes for grain yield and associated traits in wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Pooled it
- Introgression of barley chromosome arms 4H and 6H into wheat via Robertsonian translocations: GBS-assisted structural analysis and impact on grain nutrient composition.Plant molecular biology · 2026Article
- Salt stress-responsive transcription factors provide insights to enhance barley improvement: a review.Planta · 2025Review
- Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives.Evolution letters · 2024Article
- Comprehensive identification of GASA genes in sunflower and expression profiling in response to drought.BMC genomics · 2024Article
- Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.).BMC plant biology · 2024Article
- Are cereal grasses a single genetic system?Nature plants · 2024Article
- High-quality wild barley genome assemblies and annotation with Nanopore long reads and Hi-C sequencing data.Scientific data · 2023Article
- Triticeae crop genome biology: an endless frontier.Frontiers in plant science · 2023Review
- The suppression of TdMRP3 genes reduces the phytic acid and increases the nutrient accumulation in durum wheat grain.Frontiers in plant science · 2023Article
- Diversity and determinants of recombination landscapes in flowering plants.PLoS genetics · 2022Article
- Article
- Grain dispersal mechanism in cereals arose from a genome duplication followed by changes in spatial expression of genes involved in pollen development.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Epigenetics of wheat-rust interaction: an update.Planta · 2022Review
- Flow karyotyping of wheat-Frontiers in plant science · 2022Article
- Analyses ofPlants (Basel, Switzerland) · 2021Article
- Meta-QTLs, ortho-MQTLs and candidate genes for the traits contributing to salinity stress tolerance in common wheat (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Comparative Analysis of Coding and Non-Coding Features within Insect Tolerance Loci in Wheat with Their Homologs in Cereal Genomes.International journal of molecular sciences · 2021Article
- Long-read sequence assembly: a technical evaluation in barley.The Plant cell · 2021Article
- Genome-wide association study and its applications in the non-model crop Sesamum indicum.BMC plant biology · 2021Review
155 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
28 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We used a novel approach that incorporated chromosome sorting, next-generation sequencing, array hybridization, and systematic exploitation of conserved synteny with model grasses to assign ~86% of the estimated ~32,000 barley (Hordeum vulgare) genes to individual chromosome arms. Using a series of bioinformatically constructed genome zippers that integrate gene indices of rice (Oryza sativa), sorghum (Sorghum bicolor), and Brachypodium distachyon in a conserved synteny model, we were able to assemble 21,766 barley genes in a putative linear order. We show that the barley (H) genome displays a mosaic of structural similarity to hexaploid bread wheat (Triticum aestivum) A, B, and D subgenomes and that orthologous genes in different grasses exhibit signatures of positive selection in different lineages. We present an ordered, information-rich scaffold of the barley genome that provides a valuable and robust framework for the development of novel strategies in cereal breeding.
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