Evidence map›Paper›PMID 21467139›Full record

ReviewCold Spring Harbor symposia on quantitative biology2010

Drosophila heat shock system as a general model to investigate transcriptional regulation.

M J Guertin, S J Petesch, K L Zobeck, I M Min, J T Lis

Open access · bronzeAbstract readReview
In one paragraph

Review in Cold Spring Harbor symposia on quantitative biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Cell-cycle-regulated transcriptional pausing ofMolecular biology of the cell · 2025
    Article
  4. Article
  5. Cell cycle-regulated transcriptional pausing ofbioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. International journal of molecular sciences · 2023
    Article
  10. Article
  11. Article
  12. An Important Role for RPRD1B in the Heat Shock Response.Molecular and cellular biology · 2022
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. DifferentiatingeLife · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

M J GuertinDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
S J Petesch
K L Zobeck
I M Min
J T Lis
Cornell University · US

Funding

COORDINATE GENE REGULATION IN ANIMAL CELLSR01GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN T · 1985 to 2020
$8.4M
NIGMS NIH HHS R01 GM025232
6 · The paper itself

Abstract

Whereas the regulation of a gene is uniquely tailored to respond to specific biological needs, general transcriptional mechanisms are used by diversely regulated genes within and across species. The primary mode of regulation is achieved by modulating specific steps in the transcription cycle of RNA polymerase II (Pol II). Pol II "pausing" has recently been identified as a prevalent rate-limiting and regulated step in the transcription cycle. Many sequence-specific transcription factors (TFs) modulate the duration of the pause by directly or indirectly recruiting positive transcription elongation factor b (P-TEFb) kinase, which promotes escape of Pol II from the pause into productive elongation. These specialized TFs find their target-binding sites by discriminating between DNA sequence elements based on the chromatin context in which these elements reside and can result in productive changes in gene expression or nonfunctional "promiscuous" binding. The binding of a TF can precipitate drastic changes in chromatin architecture that can be both dependent and independent of active Pol II transcription. Here, we highlight heat-shock-mediated gene transcription as a model system in which to study common mechanistic features of gene regulation.

Indexed as

Gene Expression RegulationModels, AnimalTranscription, GeneticAnimalsBase SequenceDrosophila melanogasterDrosophila ProteinsHeat-Shock ResponseMolecular Sequence DataDrosophila Proteins

Identifiers

PMID21467139
PMCPMC5967404
OpenAlexW2122515081

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.