Evidence map›Paper›PMID 21464471›Full record

ArticlePlant physiology2011

White lupin cluster root acclimation to phosphorus deficiency and root hair development involve unique glycerophosphodiester phosphodiesterases.

Lingyun Cheng, Bruna Bucciarelli, Junqi Liu, Kelly Zinn, Susan Miller, Jana Patton-Vogt, Deborah Allan, Jianbo Shen, Carroll P Vance

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 104 citations in OpenAlex.

  1. Protocols for Root Developmental Studies in White Lupin.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  2. Integrated omics and functional validation identify StGDPD1 as a central regulator of salt stress tolerance in potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  3. Review
  4. The white lupin CCR1 receptor-like kinase controls systemic Autoregulation of Cluster Root and Nodule Development.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Review
  6. Genome-wide identification ofFrontiers in plant science · 2025
    Article
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  9. Review
  10. Review
  11. Review
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  19. Article
  20. A genome-wide association study reveals the quantitative trait locus and candidate genes that regulate phosphate efficiency in a Vietnamese rice collection.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Lingyun ChengDepartment of Plant Nutrition, China Agricultural University, Key Laboratory of Plant-Soil Interactions, Beijing 100193, People's Republic of China.
Bruna Bucciarelli
Junqi Liu
Kelly Zinn
Susan Miller
Jana Patton-Vogt
Deborah Allan
Jianbo Shen
Carroll P Vance
Agricultural Research Service · USUniversity of Minnesota · USChina Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

White lupin (Lupinus albus) is a legume that is very efficient in accessing unavailable phosphorus (Pi). It develops short, densely clustered tertiary lateral roots (cluster/proteoid roots) in response to Pi limitation. In this report, we characterize two glycerophosphodiester phosphodiesterase (GPX-PDE) genes (GPX-PDE1 and GPX-PDE2) from white lupin and propose a role for these two GPX-PDEs in root hair growth and development and in a Pi stress-induced phospholipid degradation pathway in cluster roots. Both GPX-PDE1 and GPX-PDE2 are highly expressed in Pi-deficient cluster roots, particularly in root hairs, epidermal cells, and vascular bundles. Expression of both genes is a function of both Pi availability and photosynthate. GPX-PDE1 Pi deficiency-induced expression is attenuated as photosynthate is deprived, while that of GPX-PDE2 is strikingly enhanced. Yeast complementation assays and in vitro enzyme assays revealed that GPX-PDE1 shows catalytic activity with glycerophosphocholine while GPX-PDE2 shows highest activity with glycerophosphoinositol. Cell-free protein extracts from Pi-deficient cluster roots display GPX-PDE enzyme activity for both glycerophosphocholine and glycerophosphoinositol. Knockdown of expression of GPX-PDE through RNA interference resulted in impaired root hair development and density. We propose that white lupin GPX-PDE1 and GPX-PDE2 are involved in the acclimation to Pi limitation by enhancing glycerophosphodiester degradation and mediating root hair development.

Indexed as

AcclimatizationDarknessEndoplasmic ReticulumEnzyme AssaysGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGene SilencingGenes, PlantGenes, ReporterGenetic Complementation TestLupinusMolecular Sequence DataMutationPhosphitesPhosphoric Diester HydrolasesPhosphorusglycerophosphodiester phosphodiesterasePhosphitesPhosphoric Diester HydrolasesPhosphorusPlant ProteinsRNA, Messenger

Identifiers

PMID21464471
PMCPMC3135957
OpenAlexW2102885300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.