Evidence map›Paper›PMID 21464319›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family.

Elena Babiychuk, Klaas Vandepoele, Josef Wissing, Miguel Garcia-Diaz, Riet De Rycke, Hana Akbari, Jérôme Joubès, Tom Beeckman, Lothar Jänsch, Margrit Frentzen and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 175 citations in OpenAlex.

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  8. Article
  9. Analysis of the TomatoPlants (Basel, Switzerland) · 2023
    Article
  10. Plastid Genome Assembly Using Long-read data.Molecular ecology resources · 2023
    Article
  11. Article
  12. Light response of gametophyte inFrontiers in plant science · 2023
    Article
  13. Article
  14. Article
  15. Article
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  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Elena BabiychukDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium.
Klaas Vandepoele
Josef Wissing
Miguel Garcia-Diaz
Riet De Rycke
Hana Akbari
Jérôme Joubès
Tom Beeckman
Lothar Jänsch
Margrit Frentzen
Marc C E Van Montagu
Sergei Kushnir
VIB-UGent Center for Plant Systems Biology · BEGhent University · BEHelmholtz Centre for Infection Research · DELaboratoire de Biogenèse Membranaire · FRRWTH Aachen University · DEStony Brook University · US

Funding

Analysis of RNA polymerase fidelity and its implications for cellular functionR00ES015421 · NIEHS · STATE UNIVERSITY NEW YORK STONY BROOK · PI GARCIA-DIAZ, MIGUEL · 2008 to 2010
$733k
NIEHS NIH HHS R00 ES015421
6 · The paper itself

Abstract

Plastids are DNA-containing organelles unique to plant cells. In Arabidopsis, one-third of the genes required for embryo development encode plastid-localized proteins. To help understand the role of plastids in embryogenesis and postembryonic development, we characterized proteins of the mitochondrial transcription termination factor (mTERF) family, which in animal models, comprises DNA-binding regulators of mitochondrial transcription. Of 35 Arabidopsis mTERF proteins, 11 are plastid-localized. Genetic complementation shows that at least one plastidic mTERF, BELAYA SMERT' (BSM), is required for embryogenesis. The main postembryonic phenotypes of genetic mosaics with the bsm mutation are severe abnormalities in leaf development. Mutant bsm cells are albino, are compromised in growth, and suffer defects in global plastidic gene expression. The bsm phenotype could be phenocopied by inhibition of plastid translation with spectinomycin. Plastid translation is essential for cell viability in dicotyledonous species such as tobacco but not in monocotyledonous maize. Here, genetic interactions between BSM and the gene encoding plastid homomeric acetyl-CoA carboxylase ACC2 suggest that there is a functional redundancy in malonyl-CoA biosynthesis that permits bsm cell survival in Arabidopsis. Overall, our results indicate that biosynthesis of malonyl-CoA and plastid-derived systemic growth-promoting compounds are the processes that link plant development and plastid gene expression.

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsGene Expression Regulation, PlantNicotianaPlant LeavesPlastidsProtein BiosynthesisZea maysArabidopsis ProteinsBasic-Leucine Zipper Transcription Factors

Identifiers

PMID21464319
PMCPMC3081001
OpenAlexW2067905913

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.