Evidence map›Paper›PMID 21460840›Full record

SynthesisNature genetics2011

Common variants at ABCA7, MS4A6A/MS4A4E, EPHA1, CD33 and CD2AP are associated with Alzheimer's disease.

Paul Hollingworth, Denise Harold, Rebecca Sims, Amy Gerrish, Jean-Charles Lambert, Minerva M Carrasquillo, Richard Abraham, Marian L Hamshere, Jaspreet Singh Pahwa, Valentina Moskvina and 165 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,195 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,195citing papers in PubMed, 6 pooled it
94.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,195 citing papers in PubMed, 6 syntheses or guidelines pooled it, 2,066 citations in OpenAlex.

  1. Pooled it
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  3. Genetic and environmental risk factors for dementia in African adults: A systematic review.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Pooled it
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  9. Cellular transcriptomic signatures underpinning the heterogeneity of depression in Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
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1,135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

175 authors at 20 institutions in 14 countries.

Paul HollingworthMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Neurosciences and Mental Health Research Institute, Department of Psychological Medicine and Neurology, School of Medicine, Cardiff University, Cardiff, UK.
Denise Harold
Rebecca Sims
Amy Gerrish
Jean-Charles Lambert
Minerva M Carrasquillo
Richard Abraham
Marian L Hamshere
Jaspreet Singh Pahwa
Valentina Moskvina
Kimberley Dowzell
Nicola Jones
Alexandra Stretton
Charlene Thomas
Alex Richards
Dobril Ivanov
Caroline Widdowson
Jade Chapman
Simon Lovestone
John Powell
Petroula Proitsi
Michelle K Lupton
Carol Brayne
David C Rubinsztein
Michael Gill
Brian Lawlor
Aoibhinn Lynch
Kristelle S Brown
Peter A Passmore
David Craig
Bernadette McGuinness
Stephen Todd
Clive Holmes
David Mann
A David Smith
Helen Beaumont
Donald Warden
Gordon Wilcock
Seth Love
Patrick G Kehoe
Nigel M Hooper
Emma R L C Vardy
John Hardy
Simon Mead
Nick C Fox
Martin Rossor
John Collinge
Wolfgang Maier
Frank Jessen
Eckart Rüther
Britta Schürmann
Reiner Heun
Heike Kölsch
Hendrik van den Bussche
Isabella Heuser
Johannes Kornhuber
Jens Wiltfang
Martin Dichgans
Lutz Frölich
Harald Hampel
John Gallacher
Michael Hüll
Dan Rujescu
Ina Giegling
Alison M Goate
John S K Kauwe
Carlos Cruchaga
Petra Nowotny
John C Morris
Kevin Mayo
Kristel Sleegers
Karolien Bettens
Sebastiaan Engelborghs
Peter P De Deyn
Christine Van Broeckhoven
Gill Livingston
Nicholas J Bass
Hugh Gurling
Andrew McQuillin
Rhian Gwilliam
Panagiotis Deloukas
Ammar Al-Chalabi
Christopher E Shaw
Magda Tsolaki
Andrew B Singleton
Rita Guerreiro
Thomas W Mühleisen
Markus M Nöthen
Susanne Moebus
Karl-Heinz Jöckel
Norman Klopp
H-Erich Wichmann
V Shane Pankratz
Sigrid B Sando
Jan O Aasly
Maria Barcikowska
Zbigniew K Wszolek
Dennis W Dickson
Neill R Graff-Radford
Ronald C Petersen
Alzheimer's Disease Neuroimaging Initiative
Cornelia M van Duijn
Monique M B Breteler
M Arfan Ikram
Anita L DeStefano
Annette L Fitzpatrick
Oscar Lopez
Lenore J Launer
Sudha Seshadri
CHARGE consortium
Claudine Berr
Dominique Campion
Jacques Epelbaum
Jean-François Dartigues
Christophe Tzourio
Annick Alpérovitch
Mark Lathrop
EADI1 consortium
Thomas M Feulner
Patricia Friedrich
Caterina Riehle
Michael Krawczak
Stefan Schreiber
Manuel Mayhaus
S Nicolhaus
Stefan Wagenpfeil
Stacy Steinberg
Hreinn Stefansson
Kari Stefansson
Jon Snaedal
Sigurbjörn Björnsson
Palmi V Jonsson
Vincent Chouraki
Benjamin Genier-Boley
Mikko Hiltunen
Hilkka Soininen
Onofre Combarros
Diana Zelenika
Marc Delepine
Maria J Bullido
Florence Pasquier
Ignacio Mateo
Ana Frank-Garcia
Elisa Porcellini
Olivier Hanon
Eliecer Coto
Victoria Alvarez
Paolo Bosco
Gabriele Siciliano
Michelangelo Mancuso
Francesco Panza
Vincenzo Solfrizzi
Benedetta Nacmias
Sandro Sorbi
Paola Bossù
Paola Piccardi
Beatrice Arosio
Giorgio Annoni
Davide Seripa
Alberto Pilotto
Elio Scarpini
Daniela Galimberti
Alexis Brice
Didier Hannequin
Federico Licastro
Lesley Jones
Peter A Holmans
Thorlakur Jonsson
Matthias Riemenschneider
Kevin Morgan
Steven G Younkin
Michael J Owen
Michael O'Donovan
Philippe Amouyel
Julie Williams
Cardiff University · GBInserm · FRUniversity of Bonn · DEUniversidad de Cantabria · ESUniversity College London · GBdeCODE Genetics (Iceland) · ISKing's College London · GBUniversity of Antwerp · BEJacksonville College · USQueen's University Belfast · GBChristian-Albrechts-Universität zu Kiel · DEJohn Radcliffe Hospital · GBMayo Clinic · USWashington University in St. Louis · USBoston University · USNational Institutes of Health · USTrinity College Dublin · IEUniversity of Freiburg · DEUniversity of Iceland · ISUniversity of Leeds · GB

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
RECRUITMENT COREU19AG010483 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FELDMAN, HOWARD · 2013 to 2020
$80.6M
Genetic Analysis Of Alzheimer s DiseaseZIAAG000950 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2009 to 2019
$6.9M
Genetic Markers of Brain AgingZIAAG007270 · NIA · NATIONAL INSTITUTE ON AGING · PI LAUNER, LENORE J · 2009 to 2025
$2.7M
Medical Research Council G0300429Medical Research Council G0601846Medical Research Council G0701075Medical Research Council G0801306Medical Research Council G0802189Medical Research Council G0900688Medical Research Council G0902227Medical Research Council G9810900Medical Research Council MC_G1000734Medical Research Council MC_U123160651NIA NIH HHS U19 AG010483NIA NIH HHS U24 AG021886Wellcome Trust 082604
6 · The paper itself

Abstract

We sought to identify new susceptibility loci for Alzheimer's disease through a staged association study (GERAD+) and by testing suggestive loci reported by the Alzheimer's Disease Genetic Consortium (ADGC) in a companion paper. We undertook a combined analysis of four genome-wide association datasets (stage 1) and identified ten newly associated variants with P ≤ 1 × 10(-5). We tested these variants for association in an independent sample (stage 2). Three SNPs at two loci replicated and showed evidence for association in a further sample (stage 3). Meta-analyses of all data provided compelling evidence that ABCA7 (rs3764650, meta P = 4.5 × 10(-17); including ADGC data, meta P = 5.0 × 10(-21)) and the MS4A gene cluster (rs610932, meta P = 1.8 × 10(-14); including ADGC data, meta P = 1.2 × 10(-16)) are new Alzheimer's disease susceptibility loci. We also found independent evidence for association for three loci reported by the ADGC, which, when combined, showed genome-wide significance: CD2AP (GERAD+, P = 8.0 × 10(-4); including ADGC data, meta P = 8.6 × 10(-9)), CD33 (GERAD+, P = 2.2 × 10(-4); including ADGC data, meta P = 1.6 × 10(-9)) and EPHA1 (GERAD+, P = 3.4 × 10(-4); including ADGC data, meta P = 6.0 × 10(-10)).

Indexed as

Adaptor Proteins, Signal TransducingAgedAged, 80 and overAlzheimer DiseaseAntigens, CDAntigens, Differentiation, MyelomonocyticATP-Binding Cassette TransportersCase-Control StudiesCytoskeletal ProteinsDatabases, GeneticFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansMaleABCA7 protein, humanAdaptor Proteins, Signal TransducingAntigens, CDAntigens, Differentiation, MyelomonocyticATP-Binding Cassette TransportersCD2-associated proteinCD33 protein, humanCytoskeletal ProteinsMembrane ProteinsMS4A4E protein, humanReceptor, EphA1Sialic Acid Binding Ig-like Lectin 3

Identifiers

PMID21460840
PMCPMC3084173
OpenAlexW2145210308

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.