Evidence map›Paper›PMID 21460236›Full record

ArticleRNA (New York, N.Y.)2011

SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer.

Marjan E Askarian-Amiri, Joanna Crawford, Juliet D French, Chanel E Smart, Martin A Smith, Michael B Clark, Kelin Ru, Tim R Mercer, Ella R Thompson, Sunil R Lakhani and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 210 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
210citing papers in PubMed, 2 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

210 citing papers in PubMed, 2 syntheses or guidelines pooled it, 338 citations in OpenAlex.

  1. The regulatory role ofOncology research · 2025
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  10. LncRNA SNHG3: a potential biomarker for human diseases.Frontiers in cell and developmental biology · 2026
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  17. Article
  18. SnoRNAs: Exploring Their Implication in Human Diseases.International journal of molecular sciences · 2024
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  20. Review

150 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Marjan E Askarian-AmiriInstitute for Molecular Bioscience, University of Queensland, St. Lucia, QLD, Australia.
Joanna Crawford
Juliet D French
Chanel E Smart
Martin A Smith
Michael B Clark
Kelin Ru
Tim R Mercer
Ella R Thompson
Sunil R Lakhani
Ana C Vargas
Ian G Campbell
Melissa A Brown
Marcel E Dinger
John S Mattick
The University of Queensland · AUPeter MacCallum Cancer Centre · AUThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are increasingly recognized to play major regulatory roles in development and disease. To identify novel regulators in breast biology, we identified differentially regulated lncRNAs during mouse mammary development. Among the highest and most differentially expressed was a transcript (Zfas1) antisense to the 5' end of the protein-coding gene Znfx1. In vivo, Zfas1 RNA is localized within the ducts and alveoli of the mammary gland. Zfas1 intronically hosts three previously undescribed C/D box snoRNAs (SNORDs): Snord12, Snord12b, and Snord12c. In contrast to the general assumption that noncoding SNORD-host transcripts function only as vehicles to generate snoRNAs, knockdown of Zfas1 in a mammary epithelial cell line resulted in increased cellular proliferation and differentiation, while not substantially altering the levels of the SNORDs. In support of an independent function, we also found that Zfas1 is extremely stable, with a half-life >16 h. Expression analysis of the SNORDs revealed these were expressed at different levels, likely a result of distinct structures conferring differential stability. While there is relatively low primary sequence conservation between Zfas1 and its syntenic human ortholog ZFAS1, their predicted secondary structures have similar features. Like Zfas1, ZFAS1 is highly expressed in the mammary gland and is down-regulated in breast tumors compared to normal tissue. We propose a functional role for Zfas1/ ZFAS1 in the regulation of alveolar development and epithelial cell differentiation in the mammary gland, which, together with its dysregulation in human breast cancer, suggests ZFAS1 as a putative tumor suppressor gene.

Indexed as

Alternative SplicingAnimalsbeta CateninBiomarkers, TumorBreast NeoplasmsCell LineFemaleGene Expression RegulationHumansMammary Glands, AnimalMammary Glands, HumanMiceRNA, Small NucleolarRNA, UntranslatedTranscription, Geneticbeta CateninBiomarkers, TumorRNA, Small NucleolarRNA, Untranslated

Identifiers

PMID21460236
PMCPMC3078737
OpenAlexW2109225342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.