Evidence map›Paper›PMID 21460210›Full record

ArticleThe Journal of biological chemistry2011

Glycomic analyses of mouse models of congenital muscular dystrophy.

Stephanie H Stalnaker, Kazuhiro Aoki, Jae-Min Lim, Mindy Porterfield, Mian Liu, Jakob S Satz, Sean Buskirk, Yufang Xiong, Peng Zhang, Kevin P Campbell and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Defining substrate specificities ofOrganic chemistry frontiers : an international journal of organic chemistry · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. 3D Structure and Function of Glycosyltransferases Involved inInternational journal of molecular sciences · 2020
    Review
  14. Article
  15. Laminin G-like domains: dystroglycan-specific lectins.Current opinion in structural biology · 2019
    Review
  16. Facile Chemoenzymatic Synthesis of O-Mannosyl Glycans.Angewandte Chemie (International ed. in English) · 2018
    Article
  17. Article
  18. Review
  19. Whoa man! Unexpected proteinThe Journal of biological chemistry · 2017
    Review
  20. Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of α-dystroglycan.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Stephanie H StalnakerComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602-4712, USA.
Kazuhiro Aoki
Jae-Min Lim
Mindy Porterfield
Mian Liu
Jakob S Satz
Sean Buskirk
Yufang Xiong
Peng Zhang
Kevin P Campbell
Huaiyu Hu
David Live
Michael Tiemeyer
Lance Wells
University of Georgia · USSUNY Upstate Medical University · USHoward Hughes Medical Institute · US

Funding

Therapeutic Potential of ESC-Derived Myogenic PrecursorsU54NS053672 · NINDS · UNIVERSITY OF IOWA · PI CAMPBELL, KEVIN P. · 2005 to 2019
$22.0M
ZINC DEFICIENCY &PROTEIN EXPRESSION IN RAT OLFACTORY BULBSP41RR018502 · NCRR · UNIVERSITY OF GEORGIA (UGA) · PI AZADI, PARASTOO · 2003 to 2011
$13.1M
Regulation of Cell-extracellular Matrix Interactions at the Brain SurfaceR01HD060458 · NICHD · UPSTATE MEDICAL UNIVERSITY · PI HU, HUAIYU · 2009 to 2013
$1.4M
Molecular Studies of Brain MalformationsR01NS066582 · NINDS · UPSTATE MEDICAL UNIVERSITY · PI HU, HUAIYU · 2009 to 2011
$612k
Howard Hughes Medical InstituteNCRR NIH HHS P41 RR018502NICHD NIH HHS HD060458NICHD NIH HHS R01 HD060458NINDS NIH HHS 1U54NS053672NINDS NIH HHS NS066582NINDS NIH HHS R01 NS066582NINDS NIH HHS U54 NS053672
6 · The paper itself

Abstract

Dystroglycanopathies are a subset of congenital muscular dystrophies wherein α-dystroglycan (α-DG) is hypoglycosylated. α-DG is an extensively O-glycosylated extracellular matrix-binding protein and a key component of the dystrophin-glycoprotein complex. Previous studies have shown α-DG to be post-translationally modified by both O-GalNAc- and O-mannose-initiated glycan structures. Mutations in defined or putative glycosyltransferase genes involved in O-mannosylation are associated with a loss of ligand-binding activity of α-DG and are causal for various forms of congenital muscular dystrophy. In this study, we sought to perform glycomic analysis on brain O-linked glycan structures released from proteins of three different knock-out mouse models associated with O-mannosylation (POMGnT1, LARGE (Myd), and DAG1(-/-)). Using mass spectrometry approaches, we were able to identify nine O-mannose-initiated and 25 O-GalNAc-initiated glycan structures in wild-type littermate control mouse brains. Through our analysis, we were able to confirm that POMGnT1 is essential for the extension of all observed O-mannose glycan structures with β1,2-linked GlcNAc. Loss of LARGE expression in the Myd mouse had no observable effect on the O-mannose-initiated glycan structures characterized here. Interestingly, we also determined that similar amounts of O-mannose-initiated glycan structures are present on brain proteins from α-DG-lacking mice (DAG1) compared with wild-type mice, indicating that there must be additional proteins that are O-mannosylated in the mammalian brain. Our findings illustrate that classical β1,2-elongation and β1,6-GlcNAc branching of O-mannose glycan structures are dependent upon the POMGnT1 enzyme and that O-mannosylation is not limited solely to α-DG in the brain.

Indexed as

AnimalsBrainCarbohydratesDisease Models, AnimalDystroglycansGalactosyltransferasesGlycomicsGlycosylationMannoseMiceMice, KnockoutMuscular DystrophiesMutationN-AcetylglucosaminyltransferasesPolysaccharidesCarbohydratesDystroglycansGalactosyltransferasesMannoseN-AcetylglucosaminyltransferasesPolysaccharidesprotein O-mannose beta-1,2-N-acetylglucosaminyltransferase

Identifiers

PMID21460210
PMCPMC3122180
OpenAlexW2133843400

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.