Evidence map›Paper›PMID 21460191›Full record

ArticleEukaryotic cell2011

Use of 1H nuclear magnetic resonance to measure intracellular metabolite levels during growth and asexual sporulation in Neurospora crassa.

James D Kim, Kayla Kaiser, Cynthia K Larive, Katherine A Borkovich

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Targeted polar metabolomics data forMicrobiology resource announcements · 2025
    Article
  3. Article
  4. Article
  5. ContinuousFrontiers in molecular biosciences · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James D KimDepartment of Plant Pathology and Microbiology, University of California, 900 University Avenue, Riverside, CA 92521, USA.
Kayla Kaiser
Cynthia K Larive
Katherine A Borkovich
University of California, Riverside · US

Funding

G PROTEINS AND SIGNAL TRANSDUCTION IN NEUROSPORA CRASSAR01GM048626 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BORKOVICH, KATHERINE A · 1998 to 2006
$1.4M
Diverse Roles for RIC8 During G Protein Signaling in FungiR01GM086565 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI BORKOVICH, KATHERINE A · 2009 to 2012
$1.2M
G PROTEINS AND SIGNAL TRANSDUCTION IN NEUROSPORA CRASSAR29GM048626 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BORKOVICH, KATHERINE A · 1993 to 1997
–
NIGMS NIH HHS GM048626NIGMS NIH HHS GM086565NIGMS NIH HHS R01 GM048626NIGMS NIH HHS R01 GM086565
6 · The paper itself

Abstract

Conidiation is an asexual sporulation pathway that is a response to adverse conditions and is the main mode of dispersal utilized by filamentous fungal pathogens for reestablishment in a more favorable environment. Heterotrimeric G proteins (consisting of α, β, and γ subunits) have been shown to regulate conidiation in diverse fungi. Previous work has demonstrated that all three of the Gα subunits in the filamentous fungus Neurospora crassa affect the accumulation of mass on poor carbon sources and that loss of gna-3 leads to the most dramatic effects on conidiation. In this study, we used (1)H nuclear magnetic resonance (NMR) to profile the metabolome of N. crassa in extracts isolated from vegetative hyphae and conidia from cultures grown under conditions of high or low sucrose. We compared wild-type and Δgna-3 strains to determine whether lack of gna-3 causes a significant difference in the global metabolite profile. The results demonstrate that the global metabolome of wild-type hyphae is influenced by carbon availability. The metabolome of the Δgna-3 strain cultured on both high and low sucrose is similar to that of the wild type grown on high sucrose, suggesting an overall defect in nutrient sensing in the mutant. However, analysis of individual metabolites revealed differences in wild-type and Δgna-3 strains cultured under conditions of low and high sucrose.

Indexed as

MetabolomeAdenosineAllantoinAmino AcidsCholineCulture MediaFumaratesFungal ProteinsGene Knockout TechniquesGlucoseMagnetic Resonance SpectroscopyMannitolMetabolomicsNeurospora crassaPrincipal Component AnalysisSpores, FungalAdenosineAllantoinAmino AcidsCholineCulture MediaFumaratesFungal ProteinsGlucoseMannitolSucroseTrehalose

Identifiers

PMID21460191
PMCPMC3127669
OpenAlexW2108596628

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.