Evidence map›Paper›PMID 21460083›Full record

ArticleJournal of bacteriology2011

Genome sequences of Mycoplasma alligatoris A21JP2T and Mycoplasma crocodyli MP145T.

D R Brown, W G Farmerie, M May, G A Benders, A S Durkin, K Hlavinka, J Hostetler, J Jackson, J Johnson, R H Miller and 4 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. CpG underrepresentation and the bacterial CpG-specific DNA methyltransferase M.MpeI.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

D R BrownDepartment of Infectious Diseases and Pathology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32608, USA. drbrown@ufl.edu
W G Farmerie
M May
G A Benders
A S Durkin
K Hlavinka
J Hostetler
J Jackson
J Johnson
R H Miller
V Paralanov
D Radune
B Szczypinski
J I Glass
J. Craig Venter Institute · USUniversity of Florida · USTowson University · US

Funding

Linked Virulence and Fitness of Mycoplasma alligatorisR01GM076584 · NIGMS · UNIVERSITY OF FLORIDA · PI BROWN, DANIEL R · 2006 to 2010
$1.3M
Mycoplasma Model of Infection-mediated Sterile InflammationR03AI076547 · NIAID · UNIVERSITY OF FLORIDA · PI BROWN, DANIEL R · 2008 to 2009
$147k
Annotation of the Mycoplasma alligatoris genomeR15HG002389 · NHGRI · UNIVERSITY OF FLORIDA · PI BROWN, DANIEL R · 2002 to 2002
$145k
NHGRI NIH HHS R15 HG002389NHGRI NIH HHS R15HG002389NIAID NIH HHS R03 AI076547NIAID NIH HHS R03AI076547NIGMS NIH HHS R01 GM076584NIGMS NIH HHS R01GM076584NIGMS NIH HHS R01GM076584-S1
6 · The paper itself

Abstract

Mycoplasma alligatoris and Mycoplasma crocodyli are closely related siblings, one being highly virulent and the other relatively attenuated. We compared their genomes to better understand the mechanisms and origins of M. alligatoris' remarkable virulence amid a clade of harmless or much less virulent species. Although its chromosome was refractory to closure, M. alligatoris differed most notably by its complement of sialidases and other genes of the N-acetylneuraminate scavenging and catabolism pathway.

Indexed as

Genome, BacterialSequence Analysis, DNADNA, BacterialMetabolic Networks and PathwaysMolecular Sequence DataMycoplasmaVirulenceDNA, Bacterial

Identifiers

PMID21460083
PMCPMC3133112
OpenAlexW2085318198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.