Evidence map›Paper›PMID 21459845›Full record

ArticleNucleic acids research2011

A novel DNA nuclease is stimulated by association with the GINS complex.

Zhuo Li, Miao Pan, Thomas J Santangelo, Wiebke Chemnitz, Wei Yuan, James L Edwards, Jerard Hurwitz, John N Reeve, Zvi Kelman

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  5. Article
  6. Open biology · 2020
    Review
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  17. Review
  18. The RecJ2 protein in the thermophilic archaeonThe Journal of biological chemistry · 2017
    Article
  19. Review
  20. Archaeal orthologs of Cdc45 and GINS form a stable complex that stimulates the helicase activity of MCM.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Zhuo LiInstitute for Bioscience and Biotechnology Research, 9600 Gudelsky Drive, Rockville, MD 20850, USA.
Miao Pan
Thomas J Santangelo
Wiebke Chemnitz
Wei Yuan
James L Edwards
Jerard Hurwitz
John N Reeve
Zvi Kelman
Institute for Bioscience and Biotechnology ResearchMemorial Sloan Kettering Cancer Center · USThe Ohio State University · USAdvanced Bioscience Laboratories (United States) · USNational Institute of Standards and Technology · USUniversity of Maryland, College Park · US

Funding

Studies on Eukaryotic ReplicationR01GM034559 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI HURWITZ, JERARD · 1985 to 2011
$9.3M
HISTONES AND NUCLEOSOMES IN ARCHAEA (ARCHAEBACTERIA)R01GM053185 · NIGMS · OHIO STATE UNIVERSITY · PI REEVE, JOHN NEWTON · 1995 to 2007
$1.7M
Archaeal Transcription TerminationF32GM073336 · NIGMS · OHIO STATE UNIVERSITY · PI SANTANGELO, THOMAS JAMES · 2005 to 2007
$151k
STUDIES ON PROCARYOTIC AND EUCARYOTIC DNA REPLICATIONR37GM034559 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI HURWITZ, JERARD · 1986 to 1995
–
NIGMS NIH HHS 1F32-GM073336NIGMS NIH HHS GM034559NIGMS NIH HHS GM53185NIGMS NIH HHS R01 GM053185
6 · The paper itself

Abstract

Chromosomal DNA replication requires the spatial and temporal coordination of the activities of several complexes that constitute the replisome. A previously uncharacterized protein, encoded by TK1252 in the archaeon Thermococcus kodakaraensis, was shown to stably interact with the archaeal GINS complex in vivo, a central component of the archaeal replisome. Here, we document that this protein (TK1252p) is a processive, single-strand DNA-specific exonuclease that degrades DNA in the 5' → 3' direction. TK1252p binds specifically to the GINS15 subunit of T. kodakaraensis GINS complex and this interaction stimulates the exonuclease activity in vitro. This novel archaeal nuclease, designated GINS-associated nuclease (GAN), also forms a complex in vivo with the euryarchaeal-specific DNA polymerase D. Roles for GAN in replisome assembly and DNA replication are discussed.

Indexed as

Archaeal ProteinsChromosomal Proteins, Non-HistoneDNA-Directed DNA PolymeraseDNA, Single-StrandedExodeoxyribonucleasesThermococcusArchaeal ProteinsChromosomal Proteins, Non-HistoneDNA-Directed DNA PolymeraseDNA, Single-StrandedExodeoxyribonucleases

Identifiers

PMID21459845
PMCPMC3152336
OpenAlexW2038887723

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.