Evidence map›Paper›PMID 21457375›Full record

ArticleThe Plant journal : for cell and molecular biology2011

Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades.

Mercedes M Keller, Yvon Jaillais, Ullas V Pedmale, Javier E Moreno, Joanne Chory, Carlos L Ballaré

Open access · greenAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
26.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 260 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Regulation of Shade Avoidance Under Low-Blue-Light by MTA in Soybean.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
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  14. Review
  15. Light signaling as cellular integrator of multiple environmental cues in plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Shade avoidance syndrome in soybean and ideotype toward shade tolerance.Molecular breeding : new strategies in plant improvement · 2023
    Article
  20. Review

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Mercedes M KellerIfeva, Consejo Nacional de Investigaciones Científicas y Técnicas, and Universidad de Buenos Aires, Avenida San Martín 4453, Buenos Aires, Argentina.
Yvon Jaillais
Ullas V Pedmale
Javier E Moreno
Joanne Chory
Carlos L Ballaré
Consejo Nacional de Investigaciones Científicas y Técnicas · ARSalk Institute for Biological Studies · USHoward Hughes Medical Institute · USUniversity of Buenos Aires · AR

Funding

INITIAL EVENTS IN PHOTORECEPTOR SIGNALINGR01GM052413 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CHORY, JOANNE · 1995 to 2016
$5.4M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM052413NIGMS NIH HHS R01 GM52413
6 · The paper itself

Abstract

Plants respond to a reduction in the red/far-red ratio (R:FR) of light, caused by the proximity of other plants, by initiating morphological changes that improve light capture. In Arabidopsis, this response (shade avoidance syndrome, SAS) is controlled by phytochromes (particularly phyB), and is dependent on the TAA1 pathway of auxin biosynthesis. However, when grown in real canopies, we found that phyB mutants and mutants deficient in TAAI (sav3) still display robust SAS responses to increased planting density and leaf shading. The SAS morphology (leaf hyponasty and reduced lamina/petiole ratio) could be phenocopied by exposing plants to blue light attenuation. These responses to blue light attenuation required the UV-A/blue light photoreceptor cry1. Moreover, they were mediated through mechanisms that showed only limited overlap with the pathways recruited by phyB inactivation. In particular, pathways for polar auxin transport, auxin biosynthesis and gibberellin signaling that are involved in SAS responses to low R:FR were not required for the SAS responses to blue light depletion. By contrast, the brassinosteroid response appeared to be required for the full expression of the SAS phenotype under low blue light. The phyB and cry1 inactivation pathways appeared to converge in their requirement for the basic/helix-loop-helix (bHLH) transcription factors PHYTOCHROME INTERACTING FACTORs 4 and 5 (PIF4 and PIF5) to elicit the SAS phenotype. Our results suggest that blue light is an important control of SAS responses, and that PIF4 and PIF5 are critical hubs for a diverse array of signaling routes that control plant architecture in canopies.

Indexed as

LightArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsBrassinosteroidsCryptochromesGene Expression Regulation, PlantIndoleacetic AcidsMutationPhytochrome BPlant LeavesSignal TransductionArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsBrassinosteroidsCRY1 protein, ArabidopsisCryptochromesIndoleacetic AcidsPHYB protein, ArabidopsisPhytochrome BPIF4 protein, ArabidopsisPIF5 protein, Arabidopsis

Identifiers

PMID21457375
PMCPMC3135679
OpenAlexW2127679407

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.