Evidence map›Paper›PMID 21456027›Full record

ArticleThe Journal of comparative neurology2011

Colocalization of hyperpolarization-activated, cyclic nucleotide-gated channel subunits in rat retinal ganglion cells.

Tyler W Stradleigh, Genki Ogata, Gloria J Partida, Hanako Oi, Kenneth P Greenberg, Kalen S Krempely, Andrew T Ishida

Open access · greenAbstract read
In one paragraph

Article in The Journal of comparative neurology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  8. Fixation strategies for retinal immunohistochemistry.Progress in retinal and eye research · 2015
    Review
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  10. Article
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  16. Article
  17. Thy1 associates with the cation channel subunit HCN4 in adult rat retina.Investigative ophthalmology & visual science · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tyler W StradleighDepartment of Neurobiology, Physiology and Behavior, University of California, Davis, California 95616, USA.
Genki Ogata
Gloria J Partida
Hanako Oi
Kenneth P Greenberg
Kalen S Krempely
Andrew T Ishida
University of California, Davis · USUniversity of California, Berkeley · US

Funding

VISION RESEARCH CORE GRANTP30EY012576 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI MARIE E BURNS · 1999 to 2026
$18.9M
PHARMACOLOGY &PHYSIOLOGY OF RETINAL GANGLION CELLSR01EY008120 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI ISHIDA, ANDREW T · 1995 to 2017
$6.7M
Vision Science Training Program: Cornea to CortexT32EY015387 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI MARIE E BURNS · 2003 to 2026
$4.8M
Photosensitive control of the inner retinaF32EY018790 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI GREENBERG, KENNETH P · 2008 to 2010
$143k
PHARMACOLOGY AND PHYSIOLOGY OF RETINAL GANGLION CELLSR29EY008120 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI ISHIDA, ANDREW T · 1989 to 1993
–
NEI NIH HHS EY018790NEI NIH HHS EY08120NEI NIH HHS EY08120-20S1NEI NIH HHS F32 EY018790NEI NIH HHS P30 EY012576NEI NIH HHS R01 EY008120NEI NIH HHS T32 EY015387PHS HHS R25 56765
6 · The paper itself

Abstract

The current-passing pore of mammalian hyperpolarization-activated, cyclic nucleotide-gated (HCN) channels is formed by subunit isoforms denoted HCN1-4. In various brain areas, antibodies directed against multiple isoforms bind to single neurons, and the current (I(h)) passed during hyperpolarizations differs from that of heterologously expressed homomeric channels. By contrast, retinal rod, cone, and bipolar cells appear to use homomeric HCN channels. Here, we assess the generality of this pattern by examining HCN1 and HCN4 immunoreactivity in rat retinal ganglion cells, measuring I(h) in dissociated cells, and testing whether HCN1 and HCN4 proteins coimmunoprecipitate. Nearly half of the ganglion cells in whole-mounted retinae bound antibodies against both isoforms. Consistent with colocalization and physical association, 8-bromo-cAMP shifted the voltage sensitivity of I(h) less than that of HCN4 channels and more than that of HCN1 channels, and HCN1 coimmunoprecipitated with HCN4 from membrane fraction proteins. Finally, the immunopositive somata ranged in diameter from the smallest to the largest in rat retina, the dendrites of immunopositive cells arborized at various levels of the inner plexiform layer and over fields of different diameters, and I(h) activated with similar kinetics and proportions of fast and slow components in small, medium, and large somata. These results show that different HCN subunits colocalize in single retinal ganglion cells, identify a subunit that can reconcile native I(h) properties with the previously reported presence of HCN4 in these cells, and indicate that I(h) is biophysically similar in morphologically diverse retinal ganglion cells and differs from I(h) in rods, cones, and bipolar cells.

Indexed as

AnimalsCyclic AMPCyclic Nucleotide-Gated Cation ChannelsHumansHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsPatch-Clamp TechniquesPotassium ChannelsProtein IsoformsProtein SubunitsRatsRetinal Ganglion CellsCyclic AMPCyclic Nucleotide-Gated Cation ChannelsHCN1 protein, humanHcn1 protein, ratHCN4 protein, ratHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsPotassium ChannelsProtein IsoformsProtein Subunits

Identifiers

PMID21456027
PMCPMC3287082
OpenAlexW2059963570

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.