Evidence map›Paper›PMID 21455542›Full record

ArticleThe Analyst2011

An isothermal amplification reactor with an integrated isolation membrane for point-of-care detection of infectious diseases.

Changchun Liu, Eran Geva, Michael Mauk, Xianbo Qiu, William R Abrams, Daniel Malamud, Kelly Curtis, S Michele Owen, Haim H Bau

Abstract read
In one paragraph

Article in The Analyst, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 175 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Palm-Sized Lab-In-A-Magnetofluidic Tube Platform for Rapid and Sensitive Virus Detection.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  7. Article
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  9. Article
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  16. Article
  17. CRISPR-Cas-Integrated LAMP.Biosensors · 2022
    Review
  18. Article
  19. Article
  20. Review

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Changchun LiuDepartment of Mechanical Engineering and Applied Mechanics, University of Pennsylvania, Philadelphia, 19104-6315, USA.
Eran Geva
Michael Mauk
Xianbo Qiu
William R Abrams
Daniel Malamud
Kelly Curtis
S Michele Owen
Haim H Bau
University of Pennsylvania · USNew York University · USCenters for Disease Control and Prevention · US

Funding

Point Detection of Pathogens in Oral Samples via UPTU01DE017855 · NIDCR · NEW YORK UNIVERSITY · PI MALAMUD, DANIEL · 2006 to 2010
$7.9M
Point Detection of Pathogens in Oral Samples via UPTU01DE014964 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI MALAMUD, DANIEL · 2002 to 2005
$4.0M
NIDCR NIH HHS U01 DE014964NIDCR NIH HHS U01 DE017855NIDCR NIH HHS U01DE017855
6 · The paper itself

Abstract

A simple, point of care, inexpensive, disposable cassette for the detection of nucleic acids extracted from pathogens was designed, constructed, and tested. The cassette utilizes a single reaction chamber for isothermal amplification of nucleic acids. The chamber is equipped with an integrated, flow-through, Flinders Technology Associates (Whatman FTA®) membrane for the isolation, concentration, and purification of DNA and/or RNA. The nucleic acids captured by the membrane are used directly as templates for amplification without elution, thus simplifying the cassette's flow control. The FTA membrane also serves another critical role-enabling the removal of inhibitors that dramatically reduce detection sensitivity. Thermal control is provided with a thin film heater external to the cassette. The amplification process was monitored in real time with a portable, compact fluorescent reader. The utility of the integrated, single-chamber cassette was demonstrated by detecting the presence of HIV-1 in oral fluids. The HIV RNA was reverse transcribed and subjected to loop-mediated, isothermal amplification (LAMP). A detection limit of less than 10 HIV particles was demonstrated. The cassette is particularly suitable for resource poor regions, where funds and trained personnel are in short supply. The cassette can be readily modified to detect nucleic acids associated with other pathogens borne in saliva, urine, and other body fluids as well as in water and food.

Indexed as

Point-of-Care SystemsHIV-1HIV InfectionsHumansMicrofluidic Analytical TechniquesNucleic Acid Amplification TechniquesRNA, ViralSalivaRNA, Viral

Identifiers

PMID21455542
PMCPMC4360993
OpenAlexW2085254036

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.