Evidence map›Paper›PMID 21455174›Full record

ArticleNature2011

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.

Elitza Deltcheva, Krzysztof Chylinski, Cynthia M Sharma, Karine Gonzales, Yanjie Chao, Zaid A Pirzada, Maria R Eckert, Jörg Vogel, Emmanuelle Charpentier

Open access · greenAbstract read
In one paragraph

Article in Nature, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,258 papers.

0numbers the graph read from it
0cells of the map it votes in
1,258citing papers in PubMed
46.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,258 citing papers in PubMed, 2,534 citations in OpenAlex.

  1. RNA therapeutics: current status and future directions.Signal transduction and targeted therapy · 2026
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  8. Bacterial small regulatory RNAs.Nature reviews. Microbiology · 2026
    Review
  9. Article
  10. Article
  11. Review
  12. Molecular mechanisms and biotechnology applications of CRISPR-Cas12a.Nature reviews. Molecular cell biology · 2026
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

1,198 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Elitza DeltchevaThe Laboratory for Molecular Infection Medicine Sweden, Umeå, Sweden.
Krzysztof Chylinski
Cynthia M Sharma
Karine Gonzales
Yanjie Chao
Zaid A Pirzada
Maria R Eckert
Jörg Vogel
Emmanuelle Charpentier
University of Würzburg · DEMax Perutz Labs · ATUmeå University · SEUniversity of Vienna · AT

Funding

Austrian Science Fund FWF P 17238
6 · The paper itself

Abstract

CRISPR/Cas systems constitute a widespread class of immunity systems that protect bacteria and archaea against phages and plasmids, and commonly use repeat/spacer-derived short crRNAs to silence foreign nucleic acids in a sequence-specific manner. Although the maturation of crRNAs represents a key event in CRISPR activation, the responsible endoribonucleases (CasE, Cas6, Csy4) are missing in many CRISPR/Cas subtypes. Here, differential RNA sequencing of the human pathogen Streptococcus pyogenes uncovered tracrRNA, a trans-encoded small RNA with 24-nucleotide complementarity to the repeat regions of crRNA precursor transcripts. We show that tracrRNA directs the maturation of crRNAs by the activities of the widely conserved endogenous RNase III and the CRISPR-associated Csn1 protein; all these components are essential to protect S. pyogenes against prophage-derived DNA. Our study reveals a novel pathway of small guide RNA maturation and the first example of a host factor (RNase III) required for bacterial RNA-mediated immunity against invaders.

Indexed as

Bacterial ProteinsConserved SequenceDNA, ViralEscherichia coliModels, BiologicalProphagesRibonuclease IIIRNA, BacterialRNA PrecursorsRNA Processing, Post-TranscriptionalRNA, Small UntranslatedStreptococcus pyogenesBacterial ProteinsDNA, ViralRibonuclease IIIRNA, BacterialRNA PrecursorsRNA, Small Untranslated

Identifiers

PMID21455174
PMCPMC3070239
OpenAlexW2120503144

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.