Evidence map›Paper›PMID 21454657›Full record

ArticleThe Journal of biological chemistry2011

Chemical trapping of the dynamic MutS-MutL complex formed in DNA mismatch repair in Escherichia coli.

Ines Winkler, Andreas D Marx, Damien Lariviere, Roger J Heinze, Michele Cristovao, Annet Reumer, Ute Curth, Titia K Sixma, Peter Friedhoff

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  5. The selection process of licensing a DNA mismatch for repair.Nature structural & molecular biology · 2021
    Article
  6. Article
  7. Frontiers in microbiology · 2019
    Article
  8. Article
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  10. Review
  11. Article
  12. Review
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  14. Review
  15. Article
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  17. Article
  18. DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Ines WinklerInstitute for Biochemistry, FB 08, Justus Liebig University, D-35392 Giessen, Germany.
Andreas D Marx
Damien Lariviere
Roger J Heinze
Michele Cristovao
Annet Reumer
Ute Curth
Titia K Sixma
Peter Friedhoff
University of Giessen · DECancer Genomics Centre · NLDépartement Santé Animale · FRErasmus MC · NLMedizinische Hochschule Hannover · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ternary complex comprising MutS, MutL, and DNA is a key intermediate in DNA mismatch repair. We used chemical cross-linking and fluorescence resonance energy transfer (FRET) to study the interaction between MutS and MutL and to shed light onto the structure of this complex. Via chemical cross-linking, we could stabilize this dynamic complex and identify the structural features of key events in DNA mismatch repair. We could show that in the complex between MutS and MutL the mismatch-binding and connector domains of MutS are in proximity to the N-terminal ATPase domain of MutL. The DNA- and nucleotide-dependent complex formation could be monitored by FRET using single cysteine variants labeled in the connector domain of MutS and the transducer domain of MutL, respectively. In addition, we could trap MutS after an ATP-induced conformational change by an intramolecular cross-link between Cys-93 of the mismatch-binding domain and Cys-239 of the connector domain.

Indexed as

DNA Mismatch RepairGene Expression Regulation, BacterialAdenosine TriphosphatasesAdenosine TriphosphateCross-Linking ReagentsCysteineDNA-Binding ProteinsDNA RepairDNA Repair EnzymesEndodeoxyribonucleasesEscherichia coliEscherichia coli ProteinsFluorescence Resonance Energy TransferMutagenesis, Site-DirectedMutL ProteinsMutS DNA Mismatch-Binding ProteinAdenosine TriphosphatasesAdenosine TriphosphateCross-Linking ReagentsCysteineDNA-Binding ProteinsDNA Repair EnzymesEndodeoxyribonucleasesEscherichia coli Proteinsmethyl-directed mismatch repair protein, E coliMutL protein, E coliMutL ProteinsMutS DNA Mismatch-Binding Protein

Identifiers

PMID21454657
PMCPMC3089574
OpenAlexW2024592771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.