Evidence map›Paper›PMID 21454654›Full record

ArticleThe Journal of biological chemistry2011

Autoinhibitory regulation of TrwK, an essential VirB4 ATPase in type IV secretion systems.

Alejandro Peña, Jorge Ripoll-Rozada, Sandra Zunzunegui, Elena Cabezón, Fernando de la Cruz, Ignacio Arechaga

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Evolution of conjugation and type IV secretion systems.Molecular biology and evolution · 2013
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alejandro PeñaDepartamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), UC-IDICAN-CSIC, Santander 39011, Spain.
Jorge Ripoll-Rozada
Sandra Zunzunegui
Elena Cabezón
Fernando de la Cruz
Ignacio Arechaga

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type IV secretion systems (T4SS) mediate the transfer of DNA and protein substrates to target cells. TrwK, encoded by the conjugative plasmid R388, is a member of the VirB4 family, comprising the largest and most conserved proteins of T4SS. In a previous work we demonstrated that TrwK is able to hydrolyze ATP. Here, based on the structural homology of VirB4 proteins with the DNA-pumping ATPase TrwB coupling protein, we generated a series of variants of TrwK where fragments of the C-terminal domain were sequentially truncated. Surprisingly, the in vitro ATPase activity of these TrwK variants was much higher than that of the wild-type enzyme. Moreover, addition of a synthetic peptide containing the amino acid residues comprising this C-terminal region resulted in the specific inhibition of the TrwK variants lacking such domain. These results indicate that the C-terminal end of TrwK plays an important regulatory role in the functioning of the T4SS.

Indexed as

Bacterial Secretion SystemsAdenosine TriphosphatasesAdenosine TriphosphateAmino Acid SequenceCell MembraneEnzymesGenetic Complementation TestHydrolysisModels, MolecularMolecular Sequence DataMutationPlasmidsProtein BindingProtein Structure, TertiarySequence Homology, Amino AcidAdenosine TriphosphatasesAdenosine TriphosphateBacterial Secretion SystemsEnzymes

Identifiers

PMID21454654
PMCPMC3089579

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.