Evidence map›Paper›PMID 21452827›Full record

ArticleThe journal of physical chemistry. B2011

Mass spectrometric characterization of oligomers in Pseudomonas aeruginosa azurin solutions.

Lucie Sokolová, Heather Williamson, Jan Sýkora, Martin Hof, Harry B Gray, Bernd Brutschy, Antonín Vlcek

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Hole Hopping Across a Protein-Protein Interface.The journal of physical chemistry. B · 2019
    Article
  5. Article
  6. Tryptophan-accelerated electron flow across a protein-protein interface.Journal of the American Chemical Society · 2013
    Article
  7. Phototriggering electron flow through Re(I)-modified Pseudomonas aeruginosa azurins.Chemistry (Weinheim an der Bergstrasse, Germany) · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Lucie SokolováInstitute of Physical and Theoretical Chemistry, Goethe University, Frankfurt am Main, Germany.
Heather Williamson
Jan Sýkora
Martin Hof
Harry B Gray
Bernd Brutschy
Antonín Vlcek
California Institute of Technology · USCzech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry · CZGoethe University Frankfurt · DEQueen Mary University of London · GB

Funding

ELECTRON-TRANSFER PROCESSES IN IRON AND COPPER PROTEINSR01DK019038 · NIDDK · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI GRAY, HARRY B, WINKLER, JAY R · 1986 to 2023
$7.0M
ELECTRON TRANSFER PROCESSES IN IRON AND COPPER PROTEINSR37DK019038 · NIDDK · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI GRAY, HARRY B · 1996 to 2003
$1.2M
NIDDK NIH HHS DK019038NIDDK NIH HHS R01 DK019038NIDDK NIH HHS R37 DK019038
6 · The paper itself

Abstract

We have employed laser-induced liquid bead ion desorption mass spectroscopy (LILBID MS) to study the solution behavior of Pseudomonas aeruginosa azurin as well as two mutants and corresponding Re-labeled derivatives containing a Re(CO)(3)(4,7-dimethyl-1,10-phenanthroline)(+) chromophore appended to a surface histidine. LILBID spectra show broad oligomer distributions whose particular patterns depend on the solution composition (pure H(2)O, 20-30 mM NaCl, 20 and 50 mM NaP(i) or NH(4)P(i) at pH = 7). The distribution maximum shifts to smaller oligomers upon decreasing the azurin concentration and increasing the buffer concentration. Oligomerization is less extensive for native azurin than its mutants. The oligomerization propensities of unlabeled and Re-labeled proteins are generally comparable, and only Re126 shows some preference for the dimer that persists even in highly diluted solutions. Peak shifts to higher masses and broadening in 20-50 mM NaP(i) confirm strong azurin association with buffer ions and solvation. We have found that LILBID MS reveals the solution behavior of weakly bound nonspecific protein oligomers, clearly distinguishing individual components of the oligomer distribution. Independently, average data on oligomerization and the dependence on solution composition were obtained by time-resolved anisotropy of the Re-label photoluminescence that confirmed relatively long rotation correlation times, 6-30 ns, depending on Re-azurin and solution composition. Labeling proteins with Re-chromophores that have long-lived phosphorescence extends the time scale of anisotropy measurements to hundreds of nanoseconds, thereby opening the way for investigations of large oligomers with long rotation times.

Indexed as

AzurinCoordination ComplexesMass SpectrometryPhenanthrolinesPolymersPseudomonas aeruginosaRheniumSolutionsTemperatureTime Factors1,10-phenanthrolineAzurinCoordination ComplexesPhenanthrolinesPolymersRheniumSolutions

Identifiers

PMID21452827
PMCPMC3085963
OpenAlexW2035308652

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.