Evidence map›Paper›PMID 21451247›Full record

ArticleJournal of biosciences2011

Effects of substitutions at position 180 in the Escherichia coli RNA polymerase σ 70 subunit.

Olga N Koroleva, Stephen J W Busby, Valeriy L Drutsa

Abstract read
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In one paragraph

Article in Journal of biosciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Olga N KorolevaChemical Faculty, Lomonosov Moscow State University, 119992 Moscow, Russia. koroleva@genebee.msu.su
Stephen J W Busby
Valeriy L Drutsa

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to investigate the role of His180 residue, located in the non-conserved region of the σ 70 subunit of Escherichia coli RNA polymerase, two mutant variants of the protein with substitutions for either alanine or glutamic acid were constructed and purified using the IMPACT system. The ability of mutant σ 70 subunits to interact with core RNA polymerase was investigated using native gel-electrophoresis. The properties of the corresponding reconstituted holoenzymes, as provided by gel shift analysis of their complexes with single- and double-stranded promoter-like DNA and by in vitro transcription experiments, allowed one to deduce that His180 influences several steps of transcription initiation, including core binding, promoter DNA recognition and open complex formation.

Indexed as

Models, MolecularAmino Acid SubstitutionBase SequenceDNA-Directed RNA PolymerasesElectrophoresisElectrophoretic Mobility Shift AssayEscherichia coliMolecular Sequence DataOligonucleotidesPlasmidsPotassium PermanganatePromoter Regions, GeneticSigma FactorDNA-Directed RNA PolymerasesOligonucleotidesPotassium PermanganateRNA polymerase sigma 70Sigma Factor

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.