Evidence map›Paper›PMID 21448210›Full record

ReviewJournal of perinatology : official journal of the California Perinatal Association2011

Protein tyrosine kinase 7: a novel surface marker for human recent thymic emigrants with potential clinical utility.

D B Lewis, C Haines, D Ross

Abstract readReview
PubMed Publisher
In one paragraph

Review in Journal of perinatology : official journal of the California Perinatal Association, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Immune vulnerability of infants to tuberculosis.Clinical & developmental immunology · 2013
    Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D B LewisDivision of Immunology and Allergy, Department of Pediatrics, The Institute for Immunology, Transplantation, and Infectious Diseases, The Interdepartmental Program Immunology, Stanford University School of Medicine, 269 Campus Drive, Stanford, CA 94305, USA. dblewis@stanford.edu
C Haines
D Ross
Stanford University · US

Funding

Recent Thymic Emigrants of the CD4 T-cell LineageR01AI083757 · NIAID · STANFORD UNIVERSITY · PI LEWIS, DAVID BRAM · 2010 to 2014
$2.2M
Recent Thymic Emigrants of the CD4 T-cell LineageR56AI083757 · NIAID · STANFORD UNIVERSITY · PI LEWIS, DAVID BRAM · 2009 to 2009
$241k
NIAID NIH HHS R01 AI-083757NIAID NIH HHS R56 AI-083757
6 · The paper itself

Abstract

Recent thymic emigrants (RTEs) are antigenically naive T cells that have recently completed intrathymic maturation and have emigrated from the thymus to the periphery. RTEs are clinically and immunologically important as they are essential for maintaining peripheral T cells in sufficient numbers in order to recognize, by their αβT-cell receptors (TCRs), a diverse array of foreign peptide antigens. However, RTE frequency and function has been poorly understood because of a lack of surface markers to distinguish them from older non-RTE naive T cells. This review summarizes the biology of the intrathymic generation and function of RTEs, including the recent identification of protein tyrosine kinase 7 (PTK7) as a novel marker for human RTEs of the CD4 (helper) T-cell lineage. PTK7+ RTEs in adults have a reduced capacity for activation-induced proliferation and cytokine production (interleukin-2 and interferon-γ) than older PTK7- naive CD4 T cells. Importantly, this immaturity in CD4 RTE effector function may contribute to the reduced adaptive immune responses observed in situations in which CD4 RTEs predominate, including the fetus, neonate and young infant, and following immune reconstitution, such as post-hematopoietic stem cell transplant. The ability to identify viable CD4+ RTEs based on PTK7 surface staining may be particularly useful in the infant for better defining the impact of nutritional and environmental factors on thymic output, peripheral T-cell function and adaptive immune responses to vaccination and infection.

Indexed as

AnimalsBiomarkersCD4-Positive T-LymphocytesCell Adhesion MoleculesCell MovementHumansInfant, NewbornMyasthenia GravisReceptor Protein-Tyrosine KinasesReceptors, Antigen, T-Cell, alpha-betaThymectomyThymus GlandBiomarkersCell Adhesion MoleculesPTK7 protein, humanReceptor Protein-Tyrosine KinasesReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID21448210
OpenAlexW1964597181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.