Evidence map›Paper›PMID 21447790›Full record

ArticleThe Plant cell2011

BROTHER OF LUX ARRHYTHMO is a component of the Arabidopsis circadian clock.

Shunhong Dai, Xiaoping Wei, Liping Pei, Rebecca L Thompson, Yi Liu, Jacqueline E Heard, Thomas G Ruff, Roger N Beachy

Abstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Circadian regulation of metabolism across photosynthetic organisms.The Plant journal : for cell and molecular biology · 2023
    Review
  12. Article
  13. Article
  14. Genome-Scale Investigation ofInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. Systems scale characterization of circadian rhythm pathway inComputational and structural biotechnology journal · 2022
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shunhong DaiDonald Danforth Plant Science Center, St. Louis, Missouri 63132, USA. sdai@danforthcenter.org
Xiaoping Wei
Liping Pei
Rebecca L Thompson
Yi Liu
Jacqueline E Heard
Thomas G Ruff
Roger N Beachy

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BROTHER OF LUX ARRHYTHMO (BOA) is a GARP family transcription factor in Arabidopsis thaliana and is regulated by circadian rhythms. Transgenic lines that constitutively overexpress BOA exhibit physiological and developmental changes, including delayed flowering time and increased vegetative growth under standard growing conditions. Arabidopsis circadian clock protein CIRCADIAN CLOCK ASSOCIATED1 (CCA1) binds to the evening element of the BOA promoter and negatively regulates its expression. Furthermore, the period of BOA rhythm was shortened in cca1-11, lhy-21 (for LATE ELONGATED HYPOCOTYL), and cca1-11 lhy-21 genetic backgrounds. BOA binds to the promoter of CCA1 through newly identified promoter binding sites and activates the transcription of CCA1 in vivo and in vitro. In transgenic Arabidopsis lines that overexpress BOA, the period length of CCA1 rhythm was increased and the amplitude was enhanced. Rhythmic expression of other clock genes, including LHY, GIGANTEA (GI), and TIMING OF CAB EXPRESSION1 (TOC1), was altered in transgenic lines that overexpress BOA. Rhythmic expression of BOA was also affected in mutant lines of toc1-1, gi-3, and gi-4. Results from these studies indicate that BOA is a critical component of the regulatory circuit of the circadian clock.

Indexed as

Circadian ClocksPromoter Regions, GeneticArabidopsisArabidopsis ProteinsDNA-Binding ProteinsFlowersGene Expression Regulation, PlantPhotoperiodPlants, Genetically ModifiedTranscription FactorsTransgenesArabidopsis ProteinsCCA1 protein, ArabidopsisDNA-Binding ProteinsGI protein, ArabidopsisLHY protein, ArabidopsisTOC1 protein, ArabidopsisTranscription Factors

Identifiers

PMID21447790
PMCPMC3082275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.