Evidence map›Paper›PMID 21445956›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2011

Comprehensive family-based association study of the glutamate transporter gene SLC1A1 in obsessive-compulsive disorder.

Jack Samuels, Ying Wang, Mark A Riddle, Benjamin D Greenberg, Abby J Fyer, James T McCracken, Scott L Rauch, Dennis L Murphy, Marco A Grados, James A Knowles and 9 more

Abstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 89 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Astroglia and Obsessive Compulsive Disorder.Advances in neurobiology · 2021
    Article
  9. Association Between theNeuropsychiatric disease and treatment · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Genetics of obsessive-compulsive disorder.Indian journal of psychiatry · 2019
    Review
  16. Article
  17. Neuronal Glutamate Transporters Control Dopaminergic Signaling and Compulsive Behaviors.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  18. Article
  19. Article
  20. OCD candidate geneProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 1 country.

Jack SamuelsDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA. jacks@jhmi.edu
Ying Wang
Mark A Riddle
Benjamin D Greenberg
Abby J Fyer
James T McCracken
Scott L Rauch
Dennis L Murphy
Marco A Grados
James A Knowles
John Piacentini
Bernadette Cullen
O Joseph Bienvenu
Steven A Rasmussen
Daniel Geller
David L Pauls
Kung-Yee Liang
Yin Y Shugart
Gerald Nestadt
Johns Hopkins Medicine · USHarvard University · USJohns Hopkins University · USUniversity of California, Los Angeles · USButler Hospital · USColumbia University · USMassachusetts General Hospital · USNational Institute of Mental Health · USNational Institutes of Health · USProvidence College · USUniversity of Southern California · US

Funding

ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BELCHER, HAROLYN MILLICENT EDITH · 1985 to 2007
$37.3M
FAMILY STUDY OF OBSESSIVE COMPULSIVE DISORDERR01MH050214 · NIMH · JOHNS HOPKINS UNIVERSITY · PI NESTADT, GERALD · 1995 to 2005
$6.6M
OCD Collaborative Genetics Association StudyR01MH071507 · NIMH · JOHNS HOPKINS UNIVERSITY · PI NESTADT, GERALD · 2007 to 2010
$6.5M
The Genetics of Obsessive Compulsive Disorder and Related OCD Spectrum DisordersZIAMH000336 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MURPHY, DENNIS L · 2009 to 2014
$4.8M
NCRR NIH HHS M01 RR000052NCRR NIH HHS RR00052NIMH NIH HHS R01 MH050214NIMH NIH HHS R01 MH071507NIMH NIH HHS R01MH071507NIMH NIH HHS R01MH50214
6 · The paper itself

Abstract

SLC1A1 encodes a neuronal glutamate transporter and is a promising candidate gene for obsessive-compulsive disorder (OCD). Several independent research groups have reported significant associations between OCD and single nucleotide polymorphisms (SNPs) in this gene. Previously, we evaluated 13 SNPs in, or near, SLC1A1 and reported a strong association signal with rs301443, a SNP 7.5 kb downstream of the gene [Shugart et al. (2009); Am J Med Genet Part B 150B:886–892]. The aims of the current study were first, to further investigate this finding by saturating the region around rs301443; and second, to explore the entire gene more thoroughly with a dense panel of SNP markers. We genotyped an additional 111 SNPs in or near SLC1A1, covering from 9 kb upstream to 84 kb downstream of the gene at average spacing of 1.7 kb per SNP, and conducted family-based association analyses in 1,576 participants in 377 families.We found that none of the surrounding markers were in linkage disequilibrium with rs301443, nor were any associated with OCD. We also found that SNP rs4740788, located about 8.8 kb upstream of the gene, was associated with OCD in all families (P = 0.003) and in families with male affecteds (P = 0.002). A three-SNP haplotype (rs4740788–rs10491734–rs10491733) was associated with OCD in the total sample (P = 0.00015) and in families with male affecteds (P = 0.0007). Although of nominal statistical significance considering the number of comparisons, these findings provide further support for the involvement of SLC1A1 in the pathogenesis of OCD.

Indexed as

Excitatory Amino Acid Transporter 3FamilyGenetic Predisposition to DiseaseGenotypeHaplotypesHumansMaleObsessive-Compulsive DisorderPolymorphism, Single NucleotideExcitatory Amino Acid Transporter 3SLC1A1 protein, human

Identifiers

PMID21445956
PMCPMC3082623
OpenAlexW2078966869

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.