Evidence map›Paper›PMID 21445262›Full record

ArticlePloS one2011

Salmonella phage ST64B encodes a member of the SseK/NleB effector family.

Nat F Brown, Brian K Coombes, Jenna L Bishop, Mark E Wickham, Michael J Lowden, Ohad Gal-Mor, David L Goode, Erin C Boyle, Kristy L Sanderson, B Brett Finlay

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Speaking the host language: howMicrobiology (Reading, England) · 2023
    Review
  5. Hybrid Vigor: Importance of Hybrid λ Phages in Early Insights in Molecular Biology.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  6. Review
  7. Glycosylating Effectors ofBiomolecules · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2020
    Article
  12. Article
  13. Article
  14. Tubulin Folding Cofactor TBCB is a Target of theInternational journal of molecular sciences · 2020
    Article
  15. Review
  16. Bacteria-Catalyzed Arginine Glycosylation in Pathogens and Host.Frontiers in cellular and infection microbiology · 2020
    Review
  17. TheFrontiers in cellular and infection microbiology · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Nat F BrownInstitute for Glycomics, Griffith University, Gold Coast, Queensland, Australia. nfbrown@unimelb.edu.au
Brian K Coombes
Jenna L Bishop
Mark E Wickham
Michael J Lowden
Ohad Gal-Mor
David L Goode
Erin C Boyle
Kristy L Sanderson
B Brett Finlay
Canada's Michael Smith Genome Sciences Centre · CAUniversity of British Columbia · CAGriffith University · AU

Funding

Canadian Institutes of Health ResearchHoward Hughes Medical Institute
6 · The paper itself

Abstract

Salmonella enterica is a species of bacteria that is a major cause of enteritis across the globe, while certain serovars cause typhoid, a more serious disease associated with a significant mortality rate. Type III secreted effectors are major contributors to the pathogenesis of Salmonella infections. Genes encoding effectors are acquired via horizontal gene transfer, and a subset are encoded within active phage lysogens. Because the acquisition of effectors is in flux, the complement of effectors possessed by various Salmonella strains frequently differs. By comparing the genome sequences of S. enterica serovar Typhimurium strain SL1344 with LT2, we identified a gene with significant similarity to SseK/NleB type III secreted effector proteins within a phage ST64B lysogen that is absent from LT2. We have named this gene sseK3. SseK3 was co-regulated with the SPI-2 type III secretion system in vitro and inside host cells, and was also injected into infected host cells. While no role for SseK3 in virulence could be identified, a role for the other family members in murine typhoid was found. SseK3 and other phage-encoded effectors were found to have a significant but sparse distribution in the available Salmonella genome sequences, indicating the potential for more uncharacterised effectors to be present in less studied serovars. These phage-encoded effectors may be principle subjects of contemporary selective processes shaping Salmonella-host interactions.

Indexed as

Amino Acid SequenceAnimalsBacterial ProteinsBase SequenceCell LineDNA PrimersFlow CytometryGenes, ViralGenome, ViralMiceMolecular Sequence DataProtein TransportSalmonellaSalmonella PhagesSequence Homology, Amino AcidVirulenceBacterial ProteinsDNA PrimersSseK1 protein, Salmonella enterica

Identifiers

PMID21445262
PMCPMC3060822
OpenAlexW2002788678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.