Evidence map›Paper›PMID 21445000›Full record

ArticleRNA biology

Splicing of an intervening sequence by protein-free human snRNAs.

Yasaman Jaladat, Bing Zhang, Afshin Mohammadi, Saba Valadkhan

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. RNAtomy of the Spliceosome's heart.The EMBO journal · 2013
    Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yasaman JaladatCenter for RNA Molecular Biology, Case Western Reserve University, Cleveland, OH, USA.
Bing Zhang
Afshin Mohammadi
Saba Valadkhan
Case Western Reserve University · US

Funding

Characterization of a minimal "spliceosome"R01GM078572 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI VALADKHAN, SABA · 2006 to 2010
$1.5M
NIGMS NIH HHS GM078572NIGMS NIH HHS R01 GM078572
6 · The paper itself

Abstract

Significant structural and mechanistic similarities between the spliceosomal snRNAs and catalytically critical domains of self-splicing group II introns have led to the hypothesis that the spliceosomes and group II introns may be evolutionarily related. We have previously shown that in vitro-transcribed, protein-free U6 and U2 snRNAs can catalyze a two-step splicing reaction in trans on two short RNA oligonucleotides that is identical to the splicing reactions performed by many self-splicing group II introns. Here we show that the same two snRNAs can perform splicing in cis by removal of an intervening sequence from a model substrate. These results prove that the protein-free snRNAs are competent to perform splicing on pre-mRNAs and further strengthen the possibility of an evolutionary relationship to group II introns.

Indexed as

IntronsRNA SplicingBase SequenceHumansMolecular Sequence DataNucleic Acid ConformationRNA, CatalyticRNA, Small NuclearRNA, CatalyticRNA, Small NuclearU2 small nuclear RNAU6 small nuclear RNA

Identifiers

PMID21445000
PMCPMC3218507
OpenAlexW2070117110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.